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The map label for this gene is 110679378

Identifier: 110679378

GI number: 110679378

Start: 2002459

End: 2003304

Strand: Direct

Name: 110679378

Synonym: RD1_2099

Alternate gene names: NA

Gene position: 2002459-2003304 (Clockwise)

Preceding gene: 110679377

Following gene: 110679379

Centisome position: 48.45

GC content: 62.88

Gene sequence:

>846_bases
ATGCGCTTTTTCGTGATCTGTGCCGCAGCTTTGTTGCTTGCGCCCCTGCCGGCAGCGGCACAGGATGATCAGACCCTTGC
CGACATCCGGCAGGAACTCACCGTGCTTTATGTGGAAATGCAGCGCCTCAAGCGCGAGCTTTCCACGACCGGTGGGCCGT
CTGTCGTCGTGGGAGGGGATACGGTGCTTGAGCGTCTGTCCGTGATGGAAGGCGAAATGCAGCGGCTGACCTCCAAGACC
GAGGAACTGGAATTCCGGGTCAACCGGATCGTCGAGGATGGGACAAACCGGATTGGCGATCTTGAATTCCGTCTGGTTGA
ACTTGAGGGCGGCGATATCAGTACCTTGGGCGAAACCACGACGCTCGGCGGCGACACGGGCGCTTCGGTGCCTGCAACCG
GCGGCACTGCGGCGCTTCAGCCGCCTGCAGCCTCGGCGGGCGTGACAGGTGGCGGTCAGCTTGCGGTCGGTGAGGAGGAT
GATTTCAAAAAGGCACAGGCGGCTTTGGCGCAAGGGAATTATCAATCCGCTGCGGATCAATTTGCCGCTTTTTCAATGAA
TTATCCGGGGGGTCCGCTGGCTGCTGGCGCTGATCTGGGCCGTGGGGAGGCACTCGAAGGGTTGGGGCGCACACGCGAAG
CGGCGCGCGCCTATCTGGACAGTTTCAGCGCAGAACCAACCGGGCAGGTGGCCCCGCAGGCGCTCTTCCGGCTTGGACGG
TCATTGGGTGCGTTGAATCAGGTCGCCGAAGCCTGCGTCACCCTAGCCGAGGTGGGCATCCGCTTTGCCGGTGATCCAGC
GGTGGCGCAAGCCGAAGAGGCCCGGCGCGCGCTGGCCTGTCAATAG

Upstream 100 bases:

>100_bases
GGCAAGGAACGCCCGATTGAGATTTGCAGCAGCGAAGAGTGTTATGCGAAAAACCGCCGGGCTGTAACGGTTCTGGCCAG
TGGCCTGTCCGGTTGATCCG

Downstream 100 bases:

>100_bases
CACGTCATGTGCGATCTTGACGCTGAGATCGACGCACATTTTGTGAATGACATCCCGAAAGCACTTGGTGTTGCCGTGTC
GGGCGGCAGTGATTCAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: L-Pal System YbgF; L-Pal System Protein YbgF

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MRFFVICAAALLLAPLPAAAQDDQTLADIRQELTVLYVEMQRLKRELSTTGGPSVVVGGDTVLERLSVMEGEMQRLTSKT
EELEFRVNRIVEDGTNRIGDLEFRLVELEGGDISTLGETTTLGGDTGASVPATGGTAALQPPAASAGVTGGGQLAVGEED
DFKKAQAALAQGNYQSAADQFAAFSMNYPGGPLAAGADLGRGEALEGLGRTREAARAYLDSFSAEPTGQVAPQALFRLGR
SLGALNQVAEACVTLAEVGIRFAGDPAVAQAEEARRALACQ

Sequences:

>Translated_281_residues
MRFFVICAAALLLAPLPAAAQDDQTLADIRQELTVLYVEMQRLKRELSTTGGPSVVVGGDTVLERLSVMEGEMQRLTSKT
EELEFRVNRIVEDGTNRIGDLEFRLVELEGGDISTLGETTTLGGDTGASVPATGGTAALQPPAASAGVTGGGQLAVGEED
DFKKAQAALAQGNYQSAADQFAAFSMNYPGGPLAAGADLGRGEALEGLGRTREAARAYLDSFSAEPTGQVAPQALFRLGR
SLGALNQVAEACVTLAEVGIRFAGDPAVAQAEEARRALACQ
>Mature_281_residues
MRFFVICAAALLLAPLPAAAQDDQTLADIRQELTVLYVEMQRLKRELSTTGGPSVVVGGDTVLERLSVMEGEMQRLTSKT
EELEFRVNRIVEDGTNRIGDLEFRLVELEGGDISTLGETTTLGGDTGASVPATGGTAALQPPAASAGVTGGGQLAVGEED
DFKKAQAALAQGNYQSAADQFAAFSMNYPGGPLAAGADLGRGEALEGLGRTREAARAYLDSFSAEPTGQVAPQALFRLGR
SLGALNQVAEACVTLAEVGIRFAGDPAVAQAEEARRALACQ

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29218; Mature: 29218

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFFVICAAALLLAPLPAAAQDDQTLADIRQELTVLYVEMQRLKRELSTTGGPSVVVGGD
CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCH
TVLERLSVMEGEMQRLTSKTEELEFRVNRIVEDGTNRIGDLEFRLVELEGGDISTLGETT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCC
TLGGDTGASVPATGGTAALQPPAASAGVTGGGQLAVGEEDDFKKAQAALAQGNYQSAADQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHH
FAAFSMNYPGGPLAAGADLGRGEALEGLGRTREAARAYLDSFSAEPTGQVAPQALFRLGR
HHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
SLGALNQVAEACVTLAEVGIRFAGDPAVAQAEEARRALACQ
HHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRFFVICAAALLLAPLPAAAQDDQTLADIRQELTVLYVEMQRLKRELSTTGGPSVVVGGD
CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCH
TVLERLSVMEGEMQRLTSKTEELEFRVNRIVEDGTNRIGDLEFRLVELEGGDISTLGETT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCC
TLGGDTGASVPATGGTAALQPPAASAGVTGGGQLAVGEEDDFKKAQAALAQGNYQSAADQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHH
FAAFSMNYPGGPLAAGADLGRGEALEGLGRTREAARAYLDSFSAEPTGQVAPQALFRLGR
HHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
SLGALNQVAEACVTLAEVGIRFAGDPAVAQAEEARRALACQ
HHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA