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The map label for this gene is 110679018

Identifier: 110679018

GI number: 110679018

Start: 1649261

End: 1650346

Strand: Reverse

Name: 110679018

Synonym: RD1_1717

Alternate gene names: NA

Gene position: 1650346-1649261 (Counterclockwise)

Preceding gene: 110679019

Following gene: 110679017

Centisome position: 39.93

GC content: 59.39

Gene sequence:

>1086_bases
ATGGACAGACGAGATTTTTTGAGGGCAGGAACCGTTGGAGTTGCAGCATCAACCCTCGCCGCGCCCGCCATCGCGCAGGA
TGTGATGCAGTGGAAGATGGTCACCGCATGGCCCAAGAACCTGCCCGGCCCTGGTGTGGCTGCGCAAATGCTTGCGGATC
GGATTACCACGCTGTCAGGTGGCCGGATTGAAGTAAAACTCTTCGCGGCGGGTGAATTGGTGCCAGGTCGCGGCGTGTTT
GATGCTGTCTCCGAGGGCACCGCGGAACTCTATCACGCCGTGCCCGCCTATTGGGGGTCGAAATCAAAGGGCATCCTGTT
GTTTGGCTCGCAACCCTTTGGCCTGCGCGCAGATGAACAATTCGGCTGGATGCAGCATGGCGGGGGGCAGGCGCTTTATG
ATGAGATGTATGGCCGTTTCGGAATCAAACCATTCCTGTGCGGCAACTCCGGCCCACAATGGGCGGGCTGGTTCAAGAAT
GAGATCAACTCCGTCGAAGACCTCAAGGGCTTGAAATTCCGAACCACCGGGATTGCGTCGCAAATGGCGGCGAAACTGGG
CATGGCCGCCGAAGCCATGAGCGGCCCGGCGATGTTCCAGGCGCTGCAGACCGGCGCGCTGGATGCGGGCGAGTTTATCG
GGCCGTGGACGGATTCTGCATTGGGCTATTATCAGGTCGCCAAGAACTACTACTGGCCGGGCGTTGGAGAACCCTCCTCC
GCAGAGGAATGCGGTGTCAACGCCGACGCTTTCGCAGCCTTGTCCGATGACCTCAAAGAGGTCGTCACGCAGGCTTGTAC
CGGGCTCTATAACCCGGTGTGGACCGAATACACGACCAAACACGCCCAGTCGCTCAAAACGCTGGTGTCAGAGCATGGCG
TCACCGTCCGCAAACTGCCCGATGACGTGATCGCTGCCATGGGCAGCGCCGCCGGTGAAATCATGGAAGAATACCGCGCG
GATGACGATGAACTGGTGCGCCGTATTACCGAGAGCTTTATCGCCTATCGCGATCTGGTTGGCGGTTACATGACCTATGC
GGACAACGGGCAGATGAATGCCCGCGCCGGAGTTTTCGGCTACTGA

Upstream 100 bases:

>100_bases
TTGATGGTGTGTTGGCGCAATGGTTGCGCGTCCCGCACCGGAACAGCGCGTCACAAACAGCCGGTTAAGAAAACGCATTC
AACCCAACAAGGAGAGAGAA

Downstream 100 bases:

>100_bases
AACACCGCTGGCGCGCGGCCCTGTGCTGCGCGCCCATCCTGCGGTAACGAGGGGGAAGTAGCGTGCTGGCATTTGCAGAC
GCGGTTGATCGGCTGAACCA

Product: solute-binding family 7 protein

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; TRAP Dicarboxylate Transporter Subunit DctP; Trap Dicarboxylate Transporter- Dctp Subunit; Transporter Periplasmic Component; TRAP Mannitol/C4-Dicarboxylate Transporter; Trap Dicarboxylate Transporter; TRAP-Type Mannitol/Chloroaromatic Compound Transport System; TRAP Dicarboxylate Transporter DctP Subunit; Tat Pathway Signal Sequence Domain-Containing Protein; Periplasmic TRAP-Type Dicarboxylate Transporter Protein; Trap-T Transport System Periplasmic Component; TRAP Dicarboxylate Transporter-DctP Subunit; C4-Dicarboxylate Transporter; TRAP Transporter; Tat Pathway Signal Sequence Domain-Containing; TRAP Dicarboxylate Transporter; TRAP Dicarboxylate Transporter- Dctp Subunit

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MDRRDFLRAGTVGVAASTLAAPAIAQDVMQWKMVTAWPKNLPGPGVAAQMLADRITTLSGGRIEVKLFAAGELVPGRGVF
DAVSEGTAELYHAVPAYWGSKSKGILLFGSQPFGLRADEQFGWMQHGGGQALYDEMYGRFGIKPFLCGNSGPQWAGWFKN
EINSVEDLKGLKFRTTGIASQMAAKLGMAAEAMSGPAMFQALQTGALDAGEFIGPWTDSALGYYQVAKNYYWPGVGEPSS
AEECGVNADAFAALSDDLKEVVTQACTGLYNPVWTEYTTKHAQSLKTLVSEHGVTVRKLPDDVIAAMGSAAGEIMEEYRA
DDDELVRRITESFIAYRDLVGGYMTYADNGQMNARAGVFGY

Sequences:

>Translated_361_residues
MDRRDFLRAGTVGVAASTLAAPAIAQDVMQWKMVTAWPKNLPGPGVAAQMLADRITTLSGGRIEVKLFAAGELVPGRGVF
DAVSEGTAELYHAVPAYWGSKSKGILLFGSQPFGLRADEQFGWMQHGGGQALYDEMYGRFGIKPFLCGNSGPQWAGWFKN
EINSVEDLKGLKFRTTGIASQMAAKLGMAAEAMSGPAMFQALQTGALDAGEFIGPWTDSALGYYQVAKNYYWPGVGEPSS
AEECGVNADAFAALSDDLKEVVTQACTGLYNPVWTEYTTKHAQSLKTLVSEHGVTVRKLPDDVIAAMGSAAGEIMEEYRA
DDDELVRRITESFIAYRDLVGGYMTYADNGQMNARAGVFGY
>Mature_361_residues
MDRRDFLRAGTVGVAASTLAAPAIAQDVMQWKMVTAWPKNLPGPGVAAQMLADRITTLSGGRIEVKLFAAGELVPGRGVF
DAVSEGTAELYHAVPAYWGSKSKGILLFGSQPFGLRADEQFGWMQHGGGQALYDEMYGRFGIKPFLCGNSGPQWAGWFKN
EINSVEDLKGLKFRTTGIASQMAAKLGMAAEAMSGPAMFQALQTGALDAGEFIGPWTDSALGYYQVAKNYYWPGVGEPSS
AEECGVNADAFAALSDDLKEVVTQACTGLYNPVWTEYTTKHAQSLKTLVSEHGVTVRKLPDDVIAAMGSAAGEIMEEYRA
DDDELVRRITESFIAYRDLVGGYMTYADNGQMNARAGVFGY

Specific function: Unknown

COG id: COG4663

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38874; Mature: 38874

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRRDFLRAGTVGVAASTLAAPAIAQDVMQWKMVTAWPKNLPGPGVAAQMLADRITTLSG
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
GRIEVKLFAAGELVPGRGVFDAVSEGTAELYHAVPAYWGSKSKGILLFGSQPFGLRADEQ
CEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCC
FGWMQHGGGQALYDEMYGRFGIKPFLCGNSGPQWAGWFKNEINSVEDLKGLKFRTTGIAS
CCHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHCHHHHHCCCEEEHHHHHH
QMAAKLGMAAEAMSGPAMFQALQTGALDAGEFIGPWTDSALGYYQVAKNYYWPGVGEPSS
HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
AEECGVNADAFAALSDDLKEVVTQACTGLYNPVWTEYTTKHAQSLKTLVSEHGVTVRKLP
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCC
DDVIAAMGSAAGEIMEEYRADDDELVRRITESFIAYRDLVGGYMTYADNGQMNARAGVFG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCC
Y
C
>Mature Secondary Structure
MDRRDFLRAGTVGVAASTLAAPAIAQDVMQWKMVTAWPKNLPGPGVAAQMLADRITTLSG
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
GRIEVKLFAAGELVPGRGVFDAVSEGTAELYHAVPAYWGSKSKGILLFGSQPFGLRADEQ
CEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCC
FGWMQHGGGQALYDEMYGRFGIKPFLCGNSGPQWAGWFKNEINSVEDLKGLKFRTTGIAS
CCHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHCHHHHHCCCEEEHHHHHH
QMAAKLGMAAEAMSGPAMFQALQTGALDAGEFIGPWTDSALGYYQVAKNYYWPGVGEPSS
HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
AEECGVNADAFAALSDDLKEVVTQACTGLYNPVWTEYTTKHAQSLKTLVSEHGVTVRKLP
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCC
DDVIAAMGSAAGEIMEEYRADDDELVRRITESFIAYRDLVGGYMTYADNGQMNARAGVFG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCC
Y
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA