| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110679019
Identifier: 110679019
GI number: 110679019
Start: 1650379
End: 1650501
Strand: Reverse
Name: 110679019
Synonym: RD1_1718
Alternate gene names: NA
Gene position: 1650501-1650379 (Counterclockwise)
Preceding gene: 110679026
Following gene: 110679018
Centisome position: 39.93
GC content: 60.16
Gene sequence:
>123_bases ATGCCAAACACCTGCATCCCGTCACACACTGCGGCCGCTGAAACTGCGCGCCTGATTGATGGTGTGTTGGCGCAATGGTT GCGCGTCCCGCACCGGAACAGCGCGTCACAAACAGCCGGTTAA
Upstream 100 bases:
>100_bases GCAAATGAGTGGCATGCGCGGCCTCCCGTGCTGAAACGACGTTGACATTTTTATGTAGCTACATATTAACTTCAAGTCGG GGATAAAACAAGGACCATAA
Downstream 100 bases:
>100_bases GAAAACGCATTCAACCCAACAAGGAGAGAGAAATGGACAGACGAGATTTTTTGAGGGCAGGAACCGTTGGAGTTGCAGCA TCAACCCTCGCCGCGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 40; Mature: 39
Protein sequence:
>40_residues MPNTCIPSHTAAAETARLIDGVLAQWLRVPHRNSASQTAG
Sequences:
>Translated_40_residues MPNTCIPSHTAAAETARLIDGVLAQWLRVPHRNSASQTAG >Mature_39_residues PNTCIPSHTAAAETARLIDGVLAQWLRVPHRNSASQTAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4243; Mature: 4112
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNTCIPSHTAAAETARLIDGVLAQWLRVPHRNSASQTAG CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PNTCIPSHTAAAETARLIDGVLAQWLRVPHRNSASQTAG CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA