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The map label for this gene is 110678930

Identifier: 110678930

GI number: 110678930

Start: 1565052

End: 1565786

Strand: Direct

Name: 110678930

Synonym: RD1_1624

Alternate gene names: NA

Gene position: 1565052-1565786 (Clockwise)

Preceding gene: 110678929

Following gene: 110678931

Centisome position: 37.87

GC content: 56.33

Gene sequence:

>735_bases
ATGGGAAGGTCCACCATGCGTAAAGCGTTCATCGCGATGCTACTCGCGGCCACGCTCGTTTTGCCCGCCATGGCGAAATC
AGATGACCGGGCGGATGATTTCGTGACCGCAAATGCGTTGGCCATTCTCTATCACGAATTGGGTCACGCGTTGATTGACA
TCCTCGGCTTGCCCGTCTTCGGTCAGGAGGAAGACGCAGCAGACGTATTGAGCGTGTTGCTGATCCACCAGCTTTACGAT
GATGGCGATGCGACCGATATCATCTATGATGCGGCCTTCGGGTTCCTGCGGGAGGCAGAAGAACATGAACCCGCGCTCTG
GGGTGTGCATGGTCCGGACCTGCAGCGCTATTACACGATGATTTGCCTGTTTTATGGCGCTGATCCCGATGCGCGCCATG
ACCTCGCAGAGGAACTTGATCTGCCGGAAGAACGACGTGACACCTGTTCCGATGAGTTTGAACTGGCCGAGGCAAGCTGG
GGTCCTGTGCTGGATGAGATTGCTGCGGAGGCGCCGGGTGAGAGCCTTGTTTTTACAGGCGACGCAACCAGTTTGCTTGG
CGCAGTGCTGGCCGAGGAGGTTGCCGCGCTGAACGCCGATTTTGTCCTGCCCGAAAGCGTTCATCTGTCCGTGCAGGATT
GCGACGAAGCAAATGGGTTTTACGACTCGGAAACACGCGAGATCATTCTGTGTTCTGAACTGGATGGGTATTTGCGCGCC
CTGTCGGATTTTTGA

Upstream 100 bases:

>100_bases
TCGATTACTGGGCCTTGATGCCCCTGTAACGGCGTGACTTCGTTGCGCATGCCGCGTAACCTGAGCGCTGTGCTCGGTTG
CTGCACGCGGGAGTACACAG

Downstream 100 bases:

>100_bases
TCGCTGTTGTGCTGAAAATGCTGGGCATGTCCCGATAGTGGCGTAACCTCGGCGCATGAAATGTTTTTGGGCTGGCGTCA
TTTATCTGTTTTGGTCCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MGRSTMRKAFIAMLLAATLVLPAMAKSDDRADDFVTANALAILYHELGHALIDILGLPVFGQEEDAADVLSVLLIHQLYD
DGDATDIIYDAAFGFLREAEEHEPALWGVHGPDLQRYYTMICLFYGADPDARHDLAEELDLPEERRDTCSDEFELAEASW
GPVLDEIAAEAPGESLVFTGDATSLLGAVLAEEVAALNADFVLPESVHLSVQDCDEANGFYDSETREIILCSELDGYLRA
LSDF

Sequences:

>Translated_244_residues
MGRSTMRKAFIAMLLAATLVLPAMAKSDDRADDFVTANALAILYHELGHALIDILGLPVFGQEEDAADVLSVLLIHQLYD
DGDATDIIYDAAFGFLREAEEHEPALWGVHGPDLQRYYTMICLFYGADPDARHDLAEELDLPEERRDTCSDEFELAEASW
GPVLDEIAAEAPGESLVFTGDATSLLGAVLAEEVAALNADFVLPESVHLSVQDCDEANGFYDSETREIILCSELDGYLRA
LSDF
>Mature_243_residues
GRSTMRKAFIAMLLAATLVLPAMAKSDDRADDFVTANALAILYHELGHALIDILGLPVFGQEEDAADVLSVLLIHQLYDD
GDATDIIYDAAFGFLREAEEHEPALWGVHGPDLQRYYTMICLFYGADPDARHDLAEELDLPEERRDTCSDEFELAEASWG
PVLDEIAAEAPGESLVFTGDATSLLGAVLAEEVAALNADFVLPESVHLSVQDCDEANGFYDSETREIILCSELDGYLRAL
SDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26705; Mature: 26574

Theoretical pI: Translated: 3.78; Mature: 3.78

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRSTMRKAFIAMLLAATLVLPAMAKSDDRADDFVTANALAILYHELGHALIDILGLPVF
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GQEEDAADVLSVLLIHQLYDDGDATDIIYDAAFGFLREAEEHEPALWGVHGPDLQRYYTM
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHH
ICLFYGADPDARHDLAEELDLPEERRDTCSDEFELAEASWGPVLDEIAAEAPGESLVFTG
HHHHCCCCCCHHHHHHHHCCCCHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCCCCEEEEC
DATSLLGAVLAEEVAALNADFVLPESVHLSVQDCDEANGFYDSETREIILCSELDGYLRA
CHHHHHHHHHHHHHHHHCCCEECCCCCEEEHHCCCCCCCCCCCCCCEEEEEHHHHHHHHH
LSDF
HHCC
>Mature Secondary Structure 
GRSTMRKAFIAMLLAATLVLPAMAKSDDRADDFVTANALAILYHELGHALIDILGLPVF
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GQEEDAADVLSVLLIHQLYDDGDATDIIYDAAFGFLREAEEHEPALWGVHGPDLQRYYTM
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHH
ICLFYGADPDARHDLAEELDLPEERRDTCSDEFELAEASWGPVLDEIAAEAPGESLVFTG
HHHHCCCCCCHHHHHHHHCCCCHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCCCCEEEEC
DATSLLGAVLAEEVAALNADFVLPESVHLSVQDCDEANGFYDSETREIILCSELDGYLRA
CHHHHHHHHHHHHHHHHCCCEECCCCCEEEHHCCCCCCCCCCCCCCEEEEEHHHHHHHHH
LSDF
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA