Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110678929

Identifier: 110678929

GI number: 110678929

Start: 1563946

End: 1564980

Strand: Direct

Name: 110678929

Synonym: RD1_1623

Alternate gene names: NA

Gene position: 1563946-1564980 (Clockwise)

Preceding gene: 110678928

Following gene: 110678930

Centisome position: 37.84

GC content: 61.74

Gene sequence:

>1035_bases
ATGCGCACCAAAACCAATGACGGCCGTTTTTTCGAGGACTACGCGGTCGGGCAGGTGATCAACCACGCGGTGCCCCGCAC
GGTGAAAATGGGCGAGCGCGCGCTTTATCATATGCTCTACCCGGCGCGGCATGCGCTTTATTCATCGGACCAGTTTGCGC
AAACCTGTGGGCTGCCCTTCAGCCCGCTGGATGACATGATCGCCTTCCATGTGGTATTTGGCAAAACCGTGCCGGATGTG
TCGCTGAATGCCATCGCCAATCTGGGCTATGCCGAAGGGCGCTGGCATCTGCCGGTCTGGCCGGGGGACACGTTGCGCTC
ACAGTCCGAGGTCATCGGGGTCAAGCAGAATTCCAACGGGAAAAGCGGCGTGGTCTGGGTGCGCACCACCGGGCTGAACC
AGCATGACGAAACAGTCATGGATTATGTGCGCTGGGTGATGGTGCGCAAACGGGACCCGGGGGCGGATGCGCCCGAACCG
GTGGTGCCGGACCTTGCCAAAGTGGTTGCGCCGGACACGCTGGTGATCCCGCGCGGTCTGGATTTCACGAACTACGATTT
CACCCTCGCCGGTGAGCCGCATCGCTGGGGGGACTACGCGGTGGGCGAGACGATTGACCATGTGGACGGCGTCACCATCG
AAGAAGCAGAGCACATGATGGCGACCCGGCTGTGGCAGAACACCGCCAAGGTGCATTTCGACACCTCTGCCCGGCCTGAT
GGCTCGCGGTTGATCTATGGCGGGCATGTGATCTCGATGGCGCGTGCGCTCAGTTTTAACGGGCTGGCGAATGCGCAGAT
GATCGTTGGACTGAATGGCGGTGCCCATGCGAACCCCTGTGTCAGTGGCGATACGGTGCGCGCGTGGTCCGAAGTGCTGG
ACAAGGCCGAAACATCCGCCCCGGGCGTTGGTGCGATCCGCTTGCGATTGGTTGCGACCAAGGGCGGCACGCCTTTCGAG
TTGCGCGGTGAGGATGGGAAATACCTGCCCGACGTGCTGCTGGACCTCGATTACTGGGCCTTGATGCCCCTGTAA

Upstream 100 bases:

>100_bases
AGACGTGGGACCATGATGCGGGTGTCATGCGGTGCGGGCAGGCGGTCACCAAAGAGGCGCCCGGCACCTATACCGCTGAC
ACCAAACTCGGAGAGCACTG

Downstream 100 bases:

>100_bases
CGGCGTGACTTCGTTGCGCATGCCGCGTAACCTGAGCGCTGTGCTCGGTTGCTGCACGCGGGAGTACACAGATGGGAAGG
TCCACCATGCGTAAAGCGTT

Product: MaoC family protein

Products: NA

Alternate protein names: MaoC Domain Protein Dehydratase; MaoC Family Protein; MaoC-Like Dehydratase; MaoC Domain-Containing Protein Dehydratase; MaoC Domain-Containing Protein; MaoC Domain Protein; Acyl Dehydratase; Dehydrogenase; Acyl Dehydratase-Like Protein; MaoC Like Domain Protein; MaoC Protein; Thiol Ester Dehydrase/Isomerase; Transcriptional Regulator; MoaC Family Protein; P40 Protein; Transcription Regulatory Protein; MaoC Dehydratase; MaoC-Like Domain-Containing Protein; Molybdenum Cofactor Biosynthesis Protein

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MRTKTNDGRFFEDYAVGQVINHAVPRTVKMGERALYHMLYPARHALYSSDQFAQTCGLPFSPLDDMIAFHVVFGKTVPDV
SLNAIANLGYAEGRWHLPVWPGDTLRSQSEVIGVKQNSNGKSGVVWVRTTGLNQHDETVMDYVRWVMVRKRDPGADAPEP
VVPDLAKVVAPDTLVIPRGLDFTNYDFTLAGEPHRWGDYAVGETIDHVDGVTIEEAEHMMATRLWQNTAKVHFDTSARPD
GSRLIYGGHVISMARALSFNGLANAQMIVGLNGGAHANPCVSGDTVRAWSEVLDKAETSAPGVGAIRLRLVATKGGTPFE
LRGEDGKYLPDVLLDLDYWALMPL

Sequences:

>Translated_344_residues
MRTKTNDGRFFEDYAVGQVINHAVPRTVKMGERALYHMLYPARHALYSSDQFAQTCGLPFSPLDDMIAFHVVFGKTVPDV
SLNAIANLGYAEGRWHLPVWPGDTLRSQSEVIGVKQNSNGKSGVVWVRTTGLNQHDETVMDYVRWVMVRKRDPGADAPEP
VVPDLAKVVAPDTLVIPRGLDFTNYDFTLAGEPHRWGDYAVGETIDHVDGVTIEEAEHMMATRLWQNTAKVHFDTSARPD
GSRLIYGGHVISMARALSFNGLANAQMIVGLNGGAHANPCVSGDTVRAWSEVLDKAETSAPGVGAIRLRLVATKGGTPFE
LRGEDGKYLPDVLLDLDYWALMPL
>Mature_344_residues
MRTKTNDGRFFEDYAVGQVINHAVPRTVKMGERALYHMLYPARHALYSSDQFAQTCGLPFSPLDDMIAFHVVFGKTVPDV
SLNAIANLGYAEGRWHLPVWPGDTLRSQSEVIGVKQNSNGKSGVVWVRTTGLNQHDETVMDYVRWVMVRKRDPGADAPEP
VVPDLAKVVAPDTLVIPRGLDFTNYDFTLAGEPHRWGDYAVGETIDHVDGVTIEEAEHMMATRLWQNTAKVHFDTSARPD
GSRLIYGGHVISMARALSFNGLANAQMIVGLNGGAHANPCVSGDTVRAWSEVLDKAETSAPGVGAIRLRLVATKGGTPFE
LRGEDGKYLPDVLLDLDYWALMPL

Specific function: Unknown

COG id: COG2030

COG function: function code I; Acyl dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37812; Mature: 37812

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTKTNDGRFFEDYAVGQVINHAVPRTVKMGERALYHMLYPARHALYSSDQFAQTCGLPF
CCCCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCC
SPLDDMIAFHVVFGKTVPDVSLNAIANLGYAEGRWHLPVWPGDTLRSQSEVIGVKQNSNG
CCHHHHHEEHHHHCCCCCCCHHHHHHCCCCCCCEEEECCCCCHHHCCCCCEEEEEECCCC
KSGVVWVRTTGLNQHDETVMDYVRWVMVRKRDPGADAPEPVVPDLAKVVAPDTLVIPRGL
CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCC
DFTNYDFTLAGEPHRWGDYAVGETIDHVDGVTIEEAEHMMATRLWQNTAKVHFDTSARPD
CCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCC
GSRLIYGGHVISMARALSFNGLANAQMIVGLNGGAHANPCVSGDTVRAWSEVLDKAETSA
CCEEEECCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCC
PGVGAIRLRLVATKGGTPFELRGEDGKYLPDVLLDLDYWALMPL
CCCCEEEEEEEEECCCCEEEEECCCCCCCHHHHHCCCHHHCCCC
>Mature Secondary Structure
MRTKTNDGRFFEDYAVGQVINHAVPRTVKMGERALYHMLYPARHALYSSDQFAQTCGLPF
CCCCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCC
SPLDDMIAFHVVFGKTVPDVSLNAIANLGYAEGRWHLPVWPGDTLRSQSEVIGVKQNSNG
CCHHHHHEEHHHHCCCCCCCHHHHHHCCCCCCCEEEECCCCCHHHCCCCCEEEEEECCCC
KSGVVWVRTTGLNQHDETVMDYVRWVMVRKRDPGADAPEPVVPDLAKVVAPDTLVIPRGL
CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCC
DFTNYDFTLAGEPHRWGDYAVGETIDHVDGVTIEEAEHMMATRLWQNTAKVHFDTSARPD
CCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCC
GSRLIYGGHVISMARALSFNGLANAQMIVGLNGGAHANPCVSGDTVRAWSEVLDKAETSA
CCEEEECCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCC
PGVGAIRLRLVATKGGTPFELRGEDGKYLPDVLLDLDYWALMPL
CCCCEEEEEEEEECCCCEEEEECCCCCCCHHHHHCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA