Click here to switch to the map view.

The map label for this gene is 110678931

Identifier: 110678931

GI number: 110678931

Start: 1565842

End: 1566507

Strand: Direct

Name: 110678931

Synonym: RD1_1625

Alternate gene names: NA

Gene position: 1565842-1566507 (Clockwise)

Preceding gene: 110678930

Following gene: 110678932

Centisome position: 37.89

GC content: 59.61

Gene sequence:

>666_bases
ATGAAATGTTTTTGGGCTGGCGTCATTTATCTGTTTTGGTCCGTGCAGGCTGCGCTGGCCTGCCAGTTGGCGCTGGTCTT
GGCGGTTGATGTTTCGGGGTCTGTCGACAAACATGAATATCGTATCCAGATGGACGGGCTTGCCGCCGGTTTGAGGGATG
GCATTGTCGTGGATGCGCTGTTGGAGCAAGAGGCGATGGTGACGCTGATCCAGTGGACCGGCTCAAGCCGTCAGCGTCAG
ACAATCGCGTGGAGCGCGTTGCGCGTGGCCGAGGATGTCACCCGACTTGCGGACCGGATCGCGGCGGATGAGCGGGTCTG
GCGCAACTATTCAACGGCCATCGGAGAGGCCCTGATCGCGGCTGAACAGGCGTTGAAATCCGTGCCCCACTGCGCGCGCA
AGGTCATTGATGTGTCAGGCGACGGGATTTCGAATGAAGGTGCCGCGCCCGCCAGTCGCCGAGCGGCGCTGAGCGCTCTG
GGCGTGACGGTAAACGCGCTGGCCATTGAAACCGATGAGGACGATCTGACCGGGTGGTTTTACGAGAACCTGATCCACGG
GGAAGGTGCCTTTGTCATGACCGCAAACGGGTTTGAGGACTATCCGGCACAGATCAAACGCAAGCTGCAACGCGAAACGA
CGCGGCAACTCAGTCAGACGGATTAA

Upstream 100 bases:

>100_bases
TGTTCTGAACTGGATGGGTATTTGCGCGCCCTGTCGGATTTTTGATCGCTGTTGTGCTGAAAATGCTGGGCATGTCCCGA
TAGTGGCGTAACCTCGGCGC

Downstream 100 bases:

>100_bases
TGTGATCACGGGTTTGCGCCGTGTGATCACAAAGGGCGCAAAAGACAGAATTTTGTTCAGATCGCGCCAATTTAACGCGG
TTTTTGAACGATGCCGCAGG

Product: von Willebrand factor type A domain-containing protein

Products: NA

Alternate protein names: Von Willebrand Factor Type A Domain-Containing Protein; Von Willebrand Factor Type A Domain Prot; Lipoprotein

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKCFWAGVIYLFWSVQAALACQLALVLAVDVSGSVDKHEYRIQMDGLAAGLRDGIVVDALLEQEAMVTLIQWTGSSRQRQ
TIAWSALRVAEDVTRLADRIAADERVWRNYSTAIGEALIAAEQALKSVPHCARKVIDVSGDGISNEGAAPASRRAALSAL
GVTVNALAIETDEDDLTGWFYENLIHGEGAFVMTANGFEDYPAQIKRKLQRETTRQLSQTD

Sequences:

>Translated_221_residues
MKCFWAGVIYLFWSVQAALACQLALVLAVDVSGSVDKHEYRIQMDGLAAGLRDGIVVDALLEQEAMVTLIQWTGSSRQRQ
TIAWSALRVAEDVTRLADRIAADERVWRNYSTAIGEALIAAEQALKSVPHCARKVIDVSGDGISNEGAAPASRRAALSAL
GVTVNALAIETDEDDLTGWFYENLIHGEGAFVMTANGFEDYPAQIKRKLQRETTRQLSQTD
>Mature_221_residues
MKCFWAGVIYLFWSVQAALACQLALVLAVDVSGSVDKHEYRIQMDGLAAGLRDGIVVDALLEQEAMVTLIQWTGSSRQRQ
TIAWSALRVAEDVTRLADRIAADERVWRNYSTAIGEALIAAEQALKSVPHCARKVIDVSGDGISNEGAAPASRRAALSAL
GVTVNALAIETDEDDLTGWFYENLIHGEGAFVMTANGFEDYPAQIKRKLQRETTRQLSQTD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24157; Mature: 24157

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCFWAGVIYLFWSVQAALACQLALVLAVDVSGSVDKHEYRIQMDGLAAGLRDGIVVDAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEECHHHHHHHCCHHHHHH
LEQEAMVTLIQWTGSSRQRQTIAWSALRVAEDVTRLADRIAADERVWRNYSTAIGEALIA
HHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEQALKSVPHCARKVIDVSGDGISNEGAAPASRRAALSALGVTVNALAIETDEDDLTGWF
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCEEEEEEEEECCCCHHHHHH
YENLIHGEGAFVMTANGFEDYPAQIKRKLQRETTRQLSQTD
HHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKCFWAGVIYLFWSVQAALACQLALVLAVDVSGSVDKHEYRIQMDGLAAGLRDGIVVDAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEECHHHHHHHCCHHHHHH
LEQEAMVTLIQWTGSSRQRQTIAWSALRVAEDVTRLADRIAADERVWRNYSTAIGEALIA
HHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEQALKSVPHCARKVIDVSGDGISNEGAAPASRRAALSALGVTVNALAIETDEDDLTGWF
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCEEEEEEEEECCCCHHHHHH
YENLIHGEGAFVMTANGFEDYPAQIKRKLQRETTRQLSQTD
HHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA