Click here to switch to the map view.

The map label for this gene is 110678928

Identifier: 110678928

GI number: 110678928

Start: 1563743

End: 1563946

Strand: Direct

Name: 110678928

Synonym: RD1_1622

Alternate gene names: NA

Gene position: 1563743-1563946 (Clockwise)

Preceding gene: 110678927

Following gene: 110678929

Centisome position: 37.83

GC content: 59.8

Gene sequence:

>204_bases
ATGATACTATACCGCTTCCTCTCGGCAGAGGATACATCCGCATTTTGCCACAAGGTCACGGAGGCGTTGAACAAGGGCTG
GTCGTTGCACGGCAGTCCGACGCAGACGTGGGACCATGATGCGGGTGTCATGCGGTGCGGGCAGGCGGTCACCAAAGAGG
CGCCCGGCACCTATACCGCTGACACCAAACTCGGAGAGCACTGA

Upstream 100 bases:

>100_bases
CGTCTGGCCATCATCACACTGGTTCTTTACGCGCTCATTTCGGCCGTTCACATATGGGCAGGCGTCTGGCCGTTCCCCAG
CTAATTCCGGAGCAATTGGC

Downstream 100 bases:

>100_bases
TGCGCACCAAAACCAATGACGGCCGTTTTTTCGAGGACTACGCGGTCGGGCAGGTGATCAACCACGCGGTGCCCCGCACG
GTGAAAATGGGCGAGCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MILYRFLSAEDTSAFCHKVTEALNKGWSLHGSPTQTWDHDAGVMRCGQAVTKEAPGTYTADTKLGEH

Sequences:

>Translated_67_residues
MILYRFLSAEDTSAFCHKVTEALNKGWSLHGSPTQTWDHDAGVMRCGQAVTKEAPGTYTADTKLGEH
>Mature_67_residues
MILYRFLSAEDTSAFCHKVTEALNKGWSLHGSPTQTWDHDAGVMRCGQAVTKEAPGTYTADTKLGEH

Specific function: Unknown

COG id: COG5515

COG function: function code S; Uncharacterized conserved small protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7368; Mature: 7368

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILYRFLSAEDTSAFCHKVTEALNKGWSLHGSPTQTWDHDAGVMRCGQAVTKEAPGTYTA
CEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
DTKLGEH
CCCCCCC
>Mature Secondary Structure
MILYRFLSAEDTSAFCHKVTEALNKGWSLHGSPTQTWDHDAGVMRCGQAVTKEAPGTYTA
CEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
DTKLGEH
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA