Click here to switch to the map view.

The map label for this gene is 110678927

Identifier: 110678927

GI number: 110678927

Start: 1563169

End: 1563726

Strand: Direct

Name: 110678927

Synonym: RD1_1621

Alternate gene names: NA

Gene position: 1563169-1563726 (Clockwise)

Preceding gene: 110678926

Following gene: 110678928

Centisome position: 37.82

GC content: 60.04

Gene sequence:

>558_bases
ATGTTACTCCTGATCGCCGGCCTGATCCTCTGGATCGCAGCGCATTACTTCAAACGTCTGATGCCGCAACAGCGCGCGGC
GATGGGGAATGCGGGCAAGGGGGGTGTGGCTGTTGCGATCATCGCATCTCTGGTGCTGATGGTGATGGGCTATCGCGCGG
CGGAGTTTATCCCGGTCTGGCAACCGCCTGCTTTCATGATGCACGTCAACAATACGCTGATGCTCTTTGCGCTCTGGGTT
TATGGATCAAGCGCGGCAAAAGGGGCCAAGGCGTGGCCTGCGTATAAACTGCGTCACCCGCAGCTTGTCGGGTTCAAGAT
CTGGGCGCTGGCGCATTTGCTGGTCAATGGCGATCTTGCGTCGATCATTCTGTTCGGCGGGCTGCTCGGCTGGGCGGTGG
GATCGGTGATCCTGATCAACAAGGCAGAACCCGAGTGGACAGCGCCAGAGCGGGCGGGCATGGCGACGCGGGTGCGTCTG
GCCATCATCACACTGGTTCTTTACGCGCTCATTTCGGCCGTTCACATATGGGCAGGCGTCTGGCCGTTCCCCAGCTAA

Upstream 100 bases:

>100_bases
GTGGTGGACAATCGGATCGTTGAAAATCTGCATGTTGCAACTGCGCGCGAAACGTTGGCAAAAAGGGACGCAATAGCAAC
CCTGAACGCGAGGTAGCCAC

Downstream 100 bases:

>100_bases
TTCCGGAGCAATTGGCATGATACTATACCGCTTCCTCTCGGCAGAGGATACATCCGCATTTTGCCACAAGGTCACGGAGG
CGTTGAACAAGGGCTGGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NnrU Protein; NnrUfamily Protein; Nitrate Reductase Protein

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MLLLIAGLILWIAAHYFKRLMPQQRAAMGNAGKGGVAVAIIASLVLMVMGYRAAEFIPVWQPPAFMMHVNNTLMLFALWV
YGSSAAKGAKAWPAYKLRHPQLVGFKIWALAHLLVNGDLASIILFGGLLGWAVGSVILINKAEPEWTAPERAGMATRVRL
AIITLVLYALISAVHIWAGVWPFPS

Sequences:

>Translated_185_residues
MLLLIAGLILWIAAHYFKRLMPQQRAAMGNAGKGGVAVAIIASLVLMVMGYRAAEFIPVWQPPAFMMHVNNTLMLFALWV
YGSSAAKGAKAWPAYKLRHPQLVGFKIWALAHLLVNGDLASIILFGGLLGWAVGSVILINKAEPEWTAPERAGMATRVRL
AIITLVLYALISAVHIWAGVWPFPS
>Mature_185_residues
MLLLIAGLILWIAAHYFKRLMPQQRAAMGNAGKGGVAVAIIASLVLMVMGYRAAEFIPVWQPPAFMMHVNNTLMLFALWV
YGSSAAKGAKAWPAYKLRHPQLVGFKIWALAHLLVNGDLASIILFGGLLGWAVGSVILINKAEPEWTAPERAGMATRVRL
AIITLVLYALISAVHIWAGVWPFPS

Specific function: Unknown

COG id: COG4094

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20156; Mature: 20156

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLIAGLILWIAAHYFKRLMPQQRAAMGNAGKGGVAVAIIASLVLMVMGYRAAEFIPVW
CHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHEEECC
QPPAFMMHVNNTLMLFALWVYGSSAAKGAKAWPAYKLRHPQLVGFKIWALAHLLVNGDLA
CCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHH
SIILFGGLLGWAVGSVILINKAEPEWTAPERAGMATRVRLAIITLVLYALISAVHIWAGV
HHHHHHHHHHHHHHHEEEEECCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
WPFPS
CCCCC
>Mature Secondary Structure
MLLLIAGLILWIAAHYFKRLMPQQRAAMGNAGKGGVAVAIIASLVLMVMGYRAAEFIPVW
CHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHEEECC
QPPAFMMHVNNTLMLFALWVYGSSAAKGAKAWPAYKLRHPQLVGFKIWALAHLLVNGDLA
CCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHH
SIILFGGLLGWAVGSVILINKAEPEWTAPERAGMATRVRLAIITLVLYALISAVHIWAGV
HHHHHHHHHHHHHHHEEEEECCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
WPFPS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA