Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

Click here to switch to the map view.

The map label for this gene is nirG [H]

Identifier: 110678877

GI number: 110678877

Start: 1493111

End: 1493560

Strand: Direct

Name: nirG [H]

Synonym: RD1_1570

Alternate gene names: 110678877

Gene position: 1493111-1493560 (Clockwise)

Preceding gene: 110678876

Following gene: 110678878

Centisome position: 36.13

GC content: 62.67

Gene sequence:

>450_bases
ATGCAGATTGACGATACCGATCGGCAGATCATCAACGCGCTGCAAACCGGGTTTCCGATTGCGCCCCGCCCCTTTGCGCT
GGCCGCTGAGCGTCTCGGACTGGCCGAGGGCGATCTGATCGCACGGCTGGCCCGCATGAAAGACGCAGGCATCATCACGC
GTTTCGGCCCGTTTCTGGACGCAGCAGCCATGGGCGGTGCCTTTTGCCTGTGTGCCATGGAAGTCCCGCCTGCGCAGTTC
GAGGCGATGACCCGCACCGTCAACAGTTTCGATGAAGTGGCGCATAATTATGCGCGCGATCACCGTCTGAACATGTGGTT
CGTGCTGGCCACCGAGACTCCCGCGGGGATCACCGAGACCGCCGCGCGCATCGAGGCGGCAACCGGCCTGCCGGTGTTCC
AGTTTCCCAAACTCAAGGAATTCTTCGTGGGCTTCCGGGTGGCGGCATGA

Upstream 100 bases:

>100_bases
CTGGTGCCCTATGAATACCGCGTCCTTTTCAGCACCCGCTGTTTTCGCCAGCAGGGTGCGCTGATCGTGGCGCCATCCAG
CAAGACATCAGGAGAATCAC

Downstream 100 bases:

>100_bases
GCATCTCACCCCAAGACCGCGCCCTGATCAAAGCCTGTCAGGCGGGCCTACCGCTGGTGCCGGAACCCTACGCGCAGATC
GCCAAACAGCTGGATATGAC

Product: nitrite reductase heme biosynthesis G

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MQIDDTDRQIINALQTGFPIAPRPFALAAERLGLAEGDLIARLARMKDAGIITRFGPFLDAAAMGGAFCLCAMEVPPAQF
EAMTRTVNSFDEVAHNYARDHRLNMWFVLATETPAGITETAARIEAATGLPVFQFPKLKEFFVGFRVAA

Sequences:

>Translated_149_residues
MQIDDTDRQIINALQTGFPIAPRPFALAAERLGLAEGDLIARLARMKDAGIITRFGPFLDAAAMGGAFCLCAMEVPPAQF
EAMTRTVNSFDEVAHNYARDHRLNMWFVLATETPAGITETAARIEAATGLPVFQFPKLKEFFVGFRVAA
>Mature_149_residues
MQIDDTDRQIINALQTGFPIAPRPFALAAERLGLAEGDLIARLARMKDAGIITRFGPFLDAAAMGGAFCLCAMEVPPAQF
EAMTRTVNSFDEVAHNYARDHRLNMWFVLATETPAGITETAARIEAATGLPVFQFPKLKEFFVGFRVAA

Specific function: Unknown

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019885
- InterPro:   IPR011991 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16292; Mature: 16292

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIDDTDRQIINALQTGFPIAPRPFALAAERLGLAEGDLIARLARMKDAGIITRFGPFLD
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
AAAMGGAFCLCAMEVPPAQFEAMTRTVNSFDEVAHNYARDHRLNMWFVLATETPAGITET
HHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHH
AARIEAATGLPVFQFPKLKEFFVGFRVAA
HHHHHHHCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MQIDDTDRQIINALQTGFPIAPRPFALAAERLGLAEGDLIARLARMKDAGIITRFGPFLD
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
AAAMGGAFCLCAMEVPPAQFEAMTRTVNSFDEVAHNYARDHRLNMWFVLATETPAGITET
HHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHH
AARIEAATGLPVFQFPKLKEFFVGFRVAA
HHHHHHHCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7588711 [H]