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The map label for this gene is nirH [H]

Identifier: 110678878

GI number: 110678878

Start: 1493557

End: 1494048

Strand: Direct

Name: nirH [H]

Synonym: RD1_1571

Alternate gene names: 110678878

Gene position: 1493557-1494048 (Clockwise)

Preceding gene: 110678877

Following gene: 110678879

Centisome position: 36.14

GC content: 60.57

Gene sequence:

>492_bases
ATGAGCATCTCACCCCAAGACCGCGCCCTGATCAAAGCCTGTCAGGCGGGCCTACCGCTGGTGCCGGAACCCTACGCGCA
GATCGCCAAACAGCTGGATATGACACAGGCGGATGTGATGAACCGCCTTGAGGTGCTGTTGGGGCAGGGGGTCATCCGCC
GTGTGGGCATTGCGCCCAATCACTATAAACTCGGCATGGCCGCCAACGGCATGACCGTCTGGGACATCGACGATGCGCAG
GCCGAAGAACTGGGCGCGCTGGTCGGTGCGATGGAGGATGTGACCCATTGCTATCTGCGTCCGCGCAAGCGGCCCGTCTG
GCCTTATAACCTTTTTGCCATGCTGCACGGCTCCACCCGCGACGAGGTTGAGGAAAAACGCCAGCATATCGTGCAATTGC
TGGGCTCTGCGGTGCGCGCGCATGACGTGCTCTATTCGACGCAAATCCTCAAGAAAACCGGTCTGCGACTGGCCAGTAAA
GGAGCCACCTGA

Upstream 100 bases:

>100_bases
GGATCACCGAGACCGCCGCGCGCATCGAGGCGGCAACCGGCCTGCCGGTGTTCCAGTTTCCCAAACTCAAGGAATTCTTC
GTGGGCTTCCGGGTGGCGGC

Downstream 100 bases:

>100_bases
TGTTTCGACTGACCCAATATATGGAACAGCTGATCACGCCCACACCACCCCGCGTCAGGCGTGGCCCGGTTCGGCCCGTT
GTGATCTGGAACCTGACGCG

Product: nitrite reductase heme biosynthesis H protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MSISPQDRALIKACQAGLPLVPEPYAQIAKQLDMTQADVMNRLEVLLGQGVIRRVGIAPNHYKLGMAANGMTVWDIDDAQ
AEELGALVGAMEDVTHCYLRPRKRPVWPYNLFAMLHGSTRDEVEEKRQHIVQLLGSAVRAHDVLYSTQILKKTGLRLASK
GAT

Sequences:

>Translated_163_residues
MSISPQDRALIKACQAGLPLVPEPYAQIAKQLDMTQADVMNRLEVLLGQGVIRRVGIAPNHYKLGMAANGMTVWDIDDAQ
AEELGALVGAMEDVTHCYLRPRKRPVWPYNLFAMLHGSTRDEVEEKRQHIVQLLGSAVRAHDVLYSTQILKKTGLRLASK
GAT
>Mature_162_residues
SISPQDRALIKACQAGLPLVPEPYAQIAKQLDMTQADVMNRLEVLLGQGVIRRVGIAPNHYKLGMAANGMTVWDIDDAQA
EELGALVGAMEDVTHCYLRPRKRPVWPYNLFAMLHGSTRDEVEEKRQHIVQLLGSAVRAHDVLYSTQILKKTGLRLASKG
AT

Specific function: Unknown

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011991 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18029; Mature: 17898

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISPQDRALIKACQAGLPLVPEPYAQIAKQLDMTQADVMNRLEVLLGQGVIRRVGIAPN
CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
HYKLGMAANGMTVWDIDDAQAEELGALVGAMEDVTHCYLRPRKRPVWPYNLFAMLHGSTR
CEEECEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCH
DEVEEKRQHIVQLLGSAVRAHDVLYSTQILKKTGLRLASKGAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC
>Mature Secondary Structure 
SISPQDRALIKACQAGLPLVPEPYAQIAKQLDMTQADVMNRLEVLLGQGVIRRVGIAPN
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
HYKLGMAANGMTVWDIDDAQAEELGALVGAMEDVTHCYLRPRKRPVWPYNLFAMLHGSTR
CEEECEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCH
DEVEEKRQHIVQLLGSAVRAHDVLYSTQILKKTGLRLASKGAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8982003; 10984043 [H]