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The map label for this gene is norD [H]

Identifier: 110678866

GI number: 110678866

Start: 1480863

End: 1482770

Strand: Reverse

Name: norD [H]

Synonym: RD1_1559

Alternate gene names: 110678866

Gene position: 1482770-1480863 (Counterclockwise)

Preceding gene: 110678867

Following gene: 110678865

Centisome position: 35.88

GC content: 64.05

Gene sequence:

>1908_bases
ATGTCGGACGCGTTGGAACCTTGGGAGCCGGAAGAAACCATCGGCAAGATCTGGCACCGCTGGGCCAGCCATTTTGACGC
GCCCGAACCCACGCACCCGCAGGCGGCGGTCCATCTGGAAGATGAAACCGCCCGCCTTTCGGTGCTGTTTCGGGGCTTGG
GCGGTGATCCATCCGTCGAAATCCGCCCCGTCATGGATGCGGCCAGCCATCACCGGCTGAGCTGGCGGCGCAGGCTGGGC
ACCTGGGTCGAGCACGCGCCCCAGGCCAGCTTTGACGGCGGTATCCTGCGCCTGCCGATCACCCTCGATCTGTTTGCCGA
CAGCGCGCTGAACCGCGGCCTTTATACGTGGCTGACGGTCTGCGCTGCCGGTGTGCGCGCCATCCCTGCGATCCCCGATG
ATCCGCTGGCCGCTGATCTGGCCTATCTGCATGTAGGGCAGGAAATGGCCCTGCGCGCGCTGACGCAATATCCCGGTTTC
AAGACGCTGTTCGTGGCCTTAAAAGACGCGCATCTGGCCGCCCGCCCCCGCCGCACCGCCCTGCCCCGTGTCGAGGCCAG
CGTTGAGAGGCTGGCGCGCTATGTTCTGGGTGAGGGCGACGCCCCGGACGCGCCACCGGGTGCCGCCCCGCGCAAATACC
GCCCCCTGCGCCCTGTGCCACTTTGGCCCCGGTTGGTGCCCGGTGGTCCCAGTGCTTTTCAGGCCATGGATGACATGCCC
GAAGAGGCCGAAACAGGCACCGAGGAAACGCTGGAAACGACCAAAAAGGGCAAACGCAAAACCGCCGATCAGACCGAACG
GCGCGACAGCCTGATCCTGCATAAATTCGAAGCGATCCTGAGTTTTACCGACTTCCTGAACCTGAACCGCCGCACCGACG
ACGATGATCTGGAGGCAGCAAAAAAGGCCATGGATGACCTTGAGGAACTCTCCCTCACCGATATCTCCAAAGCGCCTGCC
AGCAAATTCAAGCTGAACCTCGATCTGGCCCCGTCTGATGTGAACCGCGAGGCGATCTCGGGCAAACACACCTATGACGA
ATGGGATGTGCAAAGCCACAGCTACCTGCCCGATCACTGCCGGGTCTTTGCCTCGGAAACCGAACCCGCCGACGCGCCTG
CCCCGCAGGATGCCGCCGCCAAACGCCGCATCCGCAATGTGCGCCGTCAGTTCGAAACCTTTCGCCCGCGTCCCGTCACG
TTGAAAGCGCAGCCCGATGGGGACACGCTGGATTTGTCCGCCGTGATCCGCGCCCGCGCCGACATTGCTGCGACCGGGTC
GGCCCATGATCGGCTCTGGTGTCAGACACGGCCCTCTTCGCGCAATCTGGCGGTATCCATCCTGATCGACACCTCGCGCA
GCACCGAAAGTGCTGTGACCGGCCGCGCTGTGATCGACATCGAACGCGAGGCGCTGACCGCGCTGGCCTGGGGCCTGCAT
GCCTGCGGTGATCCGCTGGCGATCCACGCGTTTTCGTCATTGCGCCGCAACCGCGTCTATGTGGAGCGGTGCAAGGATTT
TTCCGAACCGATGAGCCATGAGGTCGAATGCAAGCTGGCCAGCCTGCGCCCCGGGTTCTACACCCGTCTGGGGGCCGCGA
TCCGGCATGTATCGGCAGATCTGCAAACCACGCCGCAATCGGCCAAGCTGTTGCTAGTGCTGACGGACGGCAAACCCAAC
GACATCGACCACTACGAAGGGCGTCACGGCATCGAAGACACCCGCATGGCCGTGCGTGAGGCGCGGATGCGGGGCCAGTC
CGTCTTTGGCATCACGGTCGATCCAAAAGGGCAGAGCTGGTTTCCCCGGCTGTTCGGCCCGGGCGGTTATGCGGTCATCG
CGCAACCCGAACATCTGATCACCACGTTGCCGGCGCTTTACCGCCAACTCGTCGGGGATGGGGGGTGA

Upstream 100 bases:

>100_bases
CGAACAGGCCATCCACGCGGCGATGATCGAACCGCTGTCCGATGACGAGGACGTGCAGCAGGGCCTGAACGATATCGTCA
CGGCGGTCTTTGGCTAAGCC

Downstream 100 bases:

>100_bases
GCACGCAAGTAAAGGGCCTGCCGGGCGAGGTCATGATGTGGGTGCTGATCTTCTCCGAACTCGCGGTGTTTGGCGCGGGG
CTTGCGGCCTTCATGGGTGT

Product: nitric oxide reductase D protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 635; Mature: 634

Protein sequence:

>635_residues
MSDALEPWEPEETIGKIWHRWASHFDAPEPTHPQAAVHLEDETARLSVLFRGLGGDPSVEIRPVMDAASHHRLSWRRRLG
TWVEHAPQASFDGGILRLPITLDLFADSALNRGLYTWLTVCAAGVRAIPAIPDDPLAADLAYLHVGQEMALRALTQYPGF
KTLFVALKDAHLAARPRRTALPRVEASVERLARYVLGEGDAPDAPPGAAPRKYRPLRPVPLWPRLVPGGPSAFQAMDDMP
EEAETGTEETLETTKKGKRKTADQTERRDSLILHKFEAILSFTDFLNLNRRTDDDDLEAAKKAMDDLEELSLTDISKAPA
SKFKLNLDLAPSDVNREAISGKHTYDEWDVQSHSYLPDHCRVFASETEPADAPAPQDAAAKRRIRNVRRQFETFRPRPVT
LKAQPDGDTLDLSAVIRARADIAATGSAHDRLWCQTRPSSRNLAVSILIDTSRSTESAVTGRAVIDIEREALTALAWGLH
ACGDPLAIHAFSSLRRNRVYVERCKDFSEPMSHEVECKLASLRPGFYTRLGAAIRHVSADLQTTPQSAKLLLVLTDGKPN
DIDHYEGRHGIEDTRMAVREARMRGQSVFGITVDPKGQSWFPRLFGPGGYAVIAQPEHLITTLPALYRQLVGDGG

Sequences:

>Translated_635_residues
MSDALEPWEPEETIGKIWHRWASHFDAPEPTHPQAAVHLEDETARLSVLFRGLGGDPSVEIRPVMDAASHHRLSWRRRLG
TWVEHAPQASFDGGILRLPITLDLFADSALNRGLYTWLTVCAAGVRAIPAIPDDPLAADLAYLHVGQEMALRALTQYPGF
KTLFVALKDAHLAARPRRTALPRVEASVERLARYVLGEGDAPDAPPGAAPRKYRPLRPVPLWPRLVPGGPSAFQAMDDMP
EEAETGTEETLETTKKGKRKTADQTERRDSLILHKFEAILSFTDFLNLNRRTDDDDLEAAKKAMDDLEELSLTDISKAPA
SKFKLNLDLAPSDVNREAISGKHTYDEWDVQSHSYLPDHCRVFASETEPADAPAPQDAAAKRRIRNVRRQFETFRPRPVT
LKAQPDGDTLDLSAVIRARADIAATGSAHDRLWCQTRPSSRNLAVSILIDTSRSTESAVTGRAVIDIEREALTALAWGLH
ACGDPLAIHAFSSLRRNRVYVERCKDFSEPMSHEVECKLASLRPGFYTRLGAAIRHVSADLQTTPQSAKLLLVLTDGKPN
DIDHYEGRHGIEDTRMAVREARMRGQSVFGITVDPKGQSWFPRLFGPGGYAVIAQPEHLITTLPALYRQLVGDGG
>Mature_634_residues
SDALEPWEPEETIGKIWHRWASHFDAPEPTHPQAAVHLEDETARLSVLFRGLGGDPSVEIRPVMDAASHHRLSWRRRLGT
WVEHAPQASFDGGILRLPITLDLFADSALNRGLYTWLTVCAAGVRAIPAIPDDPLAADLAYLHVGQEMALRALTQYPGFK
TLFVALKDAHLAARPRRTALPRVEASVERLARYVLGEGDAPDAPPGAAPRKYRPLRPVPLWPRLVPGGPSAFQAMDDMPE
EAETGTEETLETTKKGKRKTADQTERRDSLILHKFEAILSFTDFLNLNRRTDDDDLEAAKKAMDDLEELSLTDISKAPAS
KFKLNLDLAPSDVNREAISGKHTYDEWDVQSHSYLPDHCRVFASETEPADAPAPQDAAAKRRIRNVRRQFETFRPRPVTL
KAQPDGDTLDLSAVIRARADIAATGSAHDRLWCQTRPSSRNLAVSILIDTSRSTESAVTGRAVIDIEREALTALAWGLHA
CGDPLAIHAFSSLRRNRVYVERCKDFSEPMSHEVECKLASLRPGFYTRLGAAIRHVSADLQTTPQSAKLLLVLTDGKPND
IDHYEGRHGIEDTRMAVREARMRGQSVFGITVDPKGQSWFPRLFGPGGYAVIAQPEHLITTLPALYRQLVGDGG

Specific function: Part of the operon norEFCBQD encoding nitric oxide reductase. Essential virulence factor, probably involved in the detoxification of nitric oxide (NO) produced in the macrophages during the innate response against infection [H]

COG id: COG4548

COG function: function code P; Nitric oxide reductase activation protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: NA

Molecular weight: Translated: 70378; Mature: 70247

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDALEPWEPEETIGKIWHRWASHFDAPEPTHPQAAVHLEDETARLSVLFRGLGGDPSVE
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHEEHHHHCCCCCCCCEE
IRPVMDAASHHRLSWRRRLGTWVEHAPQASFDGGILRLPITLDLFADSALNRGLYTWLTV
EEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEHHHHHHHHCHHHHHHHH
CAAGVRAIPAIPDDPLAADLAYLHVGQEMALRALTQYPGFKTLFVALKDAHLAARPRRTA
HHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHEEHEEHHHHHHHCCCCHHC
LPRVEASVERLARYVLGEGDAPDAPPGAAPRKYRPLRPVPLWPRLVPGGPSAFQAMDDMP
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
EEAETGTEETLETTKKGKRKTADQTERRDSLILHKFEAILSFTDFLNLNRRTDDDDLEAA
HHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
KKAMDDLEELSLTDISKAPASKFKLNLDLAPSDVNREAISGKHTYDEWDVQSHSYLPDHC
HHHHHHHHHHCHHHCCCCCCCCEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHH
RVFASETEPADAPAPQDAAAKRRIRNVRRQFETFRPRPVTLKAQPDGDTLDLSAVIRARA
HEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHH
DIAATGSAHDRLWCQTRPSSRNLAVSILIDTSRSTESAVTGRAVIDIEREALTALAWGLH
CCEECCCCCCCEEEECCCCCCCEEEEEEEECCCCCCHHHCCCEEEEEHHHHHHHHHHHHH
ACGDPLAIHAFSSLRRNRVYVERCKDFSEPMSHEVECKLASLRPGFYTRLGAAIRHVSAD
HCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCC
LQTTPQSAKLLLVLTDGKPNDIDHYEGRHGIEDTRMAVREARMRGQSVFGITVDPKGQSW
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCC
FPRLFGPGGYAVIAQPEHLITTLPALYRQLVGDGG
CCHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SDALEPWEPEETIGKIWHRWASHFDAPEPTHPQAAVHLEDETARLSVLFRGLGGDPSVE
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHEEHHHHCCCCCCCCEE
IRPVMDAASHHRLSWRRRLGTWVEHAPQASFDGGILRLPITLDLFADSALNRGLYTWLTV
EEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEHHHHHHHHCHHHHHHHH
CAAGVRAIPAIPDDPLAADLAYLHVGQEMALRALTQYPGFKTLFVALKDAHLAARPRRTA
HHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHEEHEEHHHHHHHCCCCHHC
LPRVEASVERLARYVLGEGDAPDAPPGAAPRKYRPLRPVPLWPRLVPGGPSAFQAMDDMP
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
EEAETGTEETLETTKKGKRKTADQTERRDSLILHKFEAILSFTDFLNLNRRTDDDDLEAA
HHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
KKAMDDLEELSLTDISKAPASKFKLNLDLAPSDVNREAISGKHTYDEWDVQSHSYLPDHC
HHHHHHHHHHCHHHCCCCCCCCEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHH
RVFASETEPADAPAPQDAAAKRRIRNVRRQFETFRPRPVTLKAQPDGDTLDLSAVIRARA
HEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHH
DIAATGSAHDRLWCQTRPSSRNLAVSILIDTSRSTESAVTGRAVIDIEREALTALAWGLH
CCEECCCCCCCEEEECCCCCCCEEEEEEEECCCCCCHHHCCCEEEEEHHHHHHHHHHHHH
ACGDPLAIHAFSSLRRNRVYVERCKDFSEPMSHEVECKLASLRPGFYTRLGAAIRHVSAD
HCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCC
LQTTPQSAKLLLVLTDGKPNDIDHYEGRHGIEDTRMAVREARMRGQSVFGITVDPKGQSW
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCC
FPRLFGPGGYAVIAQPEHLITTLPALYRQLVGDGG
CCHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA