| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is norE [H]
Identifier: 110678865
GI number: 110678865
Start: 1480336
End: 1480866
Strand: Reverse
Name: norE [H]
Synonym: RD1_1558
Alternate gene names: 110678865
Gene position: 1480866-1480336 (Counterclockwise)
Preceding gene: 110678866
Following gene: 110678864
Centisome position: 35.83
GC content: 59.51
Gene sequence:
>531_bases GTGAGCACGCAAGTAAAGGGCCTGCCGGGCGAGGTCATGATGTGGGTGCTGATCTTCTCCGAACTCGCGGTGTTTGGCGC GGGGCTTGCGGCCTTCATGGGTGTGCGCCTGACCGACCCGGCGGGATTTGCCGCCGCGCAAGGCAATCTGATGATTGAAC TGGCCGGAACGAATACGATCATCCTGATCACTTCGGGCCTGTTCGCCGCCCTTGCCTGTATCGCCACAACAACACGCGCC GCGCGCCTTTGGCTGTTGGCCGCCAGCCTGCTGGGCATGGTGTTTTTGTGGCTCAAGGGGATCGAATATGCCGCGAAATC TGCCGCCGGGATCACGTTTGAAACCCATGGGTTCTATACGTTTTACTACCTGCTCACCGGGTTTCACGCAGCACATGTGA TCGCCGGTATCGTCATTCTGGCACTGGTCGGTTGGAGCGCGCACCCCCGCGTCATCCAGACCGGCGTTGCATTCTGGCAT ATGGTCGATCTGGTCTGGGTGCTGCTTTTTCCGGTCATCTACCTGCTATGA
Upstream 100 bases:
>100_bases CCCGGCTGTTCGGCCCGGGCGGTTATGCGGTCATCGCGCAACCCGAACATCTGATCACCACGTTGCCGGCGCTTTACCGC CAACTCGTCGGGGATGGGGG
Downstream 100 bases:
>100_bases CGCGCAGCACTCTGATCCGTGCATGGCTCGCACTTGCAGCCCTCACCGCCTTGGGCACAGCGCTGCATTTCAGCGCCCTG CCGCCCAAAATTGCCGGTGG
Product: NorE protein
Products: NA
Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III [H]
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MSTQVKGLPGEVMMWVLIFSELAVFGAGLAAFMGVRLTDPAGFAAAQGNLMIELAGTNTIILITSGLFAALACIATTTRA ARLWLLAASLLGMVFLWLKGIEYAAKSAAGITFETHGFYTFYYLLTGFHAAHVIAGIVILALVGWSAHPRVIQTGVAFWH MVDLVWVLLFPVIYLL
Sequences:
>Translated_176_residues MSTQVKGLPGEVMMWVLIFSELAVFGAGLAAFMGVRLTDPAGFAAAQGNLMIELAGTNTIILITSGLFAALACIATTTRA ARLWLLAASLLGMVFLWLKGIEYAAKSAAGITFETHGFYTFYYLLTGFHAAHVIAGIVILALVGWSAHPRVIQTGVAFWH MVDLVWVLLFPVIYLL >Mature_175_residues STQVKGLPGEVMMWVLIFSELAVFGAGLAAFMGVRLTDPAGFAAAQGNLMIELAGTNTIILITSGLFAALACIATTTRAA RLWLLAASLLGMVFLWLKGIEYAAKSAAGITFETHGFYTFYYLLTGFHAAHVIAGIVILALVGWSAHPRVIQTGVAFWHM VDLVWVLLFPVIYLL
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000298 - InterPro: IPR013833 [H]
Pfam domain/function: PF00510 COX3 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 18937; Mature: 18806
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQVKGLPGEVMMWVLIFSELAVFGAGLAAFMGVRLTDPAGFAAAQGNLMIELAGTNTI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCEEECCCEEEEEECCCEE ILITSGLFAALACIATTTRAARLWLLAASLLGMVFLWLKGIEYAAKSAAGITFETHGFYT EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHH FYYLLTGFHAAHVIAGIVILALVGWSAHPRVIQTGVAFWHMVDLVWVLLFPVIYLL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure STQVKGLPGEVMMWVLIFSELAVFGAGLAAFMGVRLTDPAGFAAAQGNLMIELAGTNTI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCEEECCCEEEEEECCCEE ILITSGLFAALACIATTTRAARLWLLAASLLGMVFLWLKGIEYAAKSAAGITFETHGFYT EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHH FYYLLTGFHAAHVIAGIVILALVGWSAHPRVIQTGVAFWHMVDLVWVLLFPVIYLL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11572948; 12692562 [H]