Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is norE [H]

Identifier: 110678865

GI number: 110678865

Start: 1480336

End: 1480866

Strand: Reverse

Name: norE [H]

Synonym: RD1_1558

Alternate gene names: 110678865

Gene position: 1480866-1480336 (Counterclockwise)

Preceding gene: 110678866

Following gene: 110678864

Centisome position: 35.83

GC content: 59.51

Gene sequence:

>531_bases
GTGAGCACGCAAGTAAAGGGCCTGCCGGGCGAGGTCATGATGTGGGTGCTGATCTTCTCCGAACTCGCGGTGTTTGGCGC
GGGGCTTGCGGCCTTCATGGGTGTGCGCCTGACCGACCCGGCGGGATTTGCCGCCGCGCAAGGCAATCTGATGATTGAAC
TGGCCGGAACGAATACGATCATCCTGATCACTTCGGGCCTGTTCGCCGCCCTTGCCTGTATCGCCACAACAACACGCGCC
GCGCGCCTTTGGCTGTTGGCCGCCAGCCTGCTGGGCATGGTGTTTTTGTGGCTCAAGGGGATCGAATATGCCGCGAAATC
TGCCGCCGGGATCACGTTTGAAACCCATGGGTTCTATACGTTTTACTACCTGCTCACCGGGTTTCACGCAGCACATGTGA
TCGCCGGTATCGTCATTCTGGCACTGGTCGGTTGGAGCGCGCACCCCCGCGTCATCCAGACCGGCGTTGCATTCTGGCAT
ATGGTCGATCTGGTCTGGGTGCTGCTTTTTCCGGTCATCTACCTGCTATGA

Upstream 100 bases:

>100_bases
CCCGGCTGTTCGGCCCGGGCGGTTATGCGGTCATCGCGCAACCCGAACATCTGATCACCACGTTGCCGGCGCTTTACCGC
CAACTCGTCGGGGATGGGGG

Downstream 100 bases:

>100_bases
CGCGCAGCACTCTGATCCGTGCATGGCTCGCACTTGCAGCCCTCACCGCCTTGGGCACAGCGCTGCATTTCAGCGCCCTG
CCGCCCAAAATTGCCGGTGG

Product: NorE protein

Products: NA

Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III [H]

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MSTQVKGLPGEVMMWVLIFSELAVFGAGLAAFMGVRLTDPAGFAAAQGNLMIELAGTNTIILITSGLFAALACIATTTRA
ARLWLLAASLLGMVFLWLKGIEYAAKSAAGITFETHGFYTFYYLLTGFHAAHVIAGIVILALVGWSAHPRVIQTGVAFWH
MVDLVWVLLFPVIYLL

Sequences:

>Translated_176_residues
MSTQVKGLPGEVMMWVLIFSELAVFGAGLAAFMGVRLTDPAGFAAAQGNLMIELAGTNTIILITSGLFAALACIATTTRA
ARLWLLAASLLGMVFLWLKGIEYAAKSAAGITFETHGFYTFYYLLTGFHAAHVIAGIVILALVGWSAHPRVIQTGVAFWH
MVDLVWVLLFPVIYLL
>Mature_175_residues
STQVKGLPGEVMMWVLIFSELAVFGAGLAAFMGVRLTDPAGFAAAQGNLMIELAGTNTIILITSGLFAALACIATTTRAA
RLWLLAASLLGMVFLWLKGIEYAAKSAAGITFETHGFYTFYYLLTGFHAAHVIAGIVILALVGWSAHPRVIQTGVAFWHM
VDLVWVLLFPVIYLL

Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000298
- InterPro:   IPR013833 [H]

Pfam domain/function: PF00510 COX3 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 18937; Mature: 18806

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTQVKGLPGEVMMWVLIFSELAVFGAGLAAFMGVRLTDPAGFAAAQGNLMIELAGTNTI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCEEECCCEEEEEECCCEE
ILITSGLFAALACIATTTRAARLWLLAASLLGMVFLWLKGIEYAAKSAAGITFETHGFYT
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHH
FYYLLTGFHAAHVIAGIVILALVGWSAHPRVIQTGVAFWHMVDLVWVLLFPVIYLL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
STQVKGLPGEVMMWVLIFSELAVFGAGLAAFMGVRLTDPAGFAAAQGNLMIELAGTNTI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCEEECCCEEEEEECCCEE
ILITSGLFAALACIATTTRAARLWLLAASLLGMVFLWLKGIEYAAKSAAGITFETHGFYT
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHH
FYYLLTGFHAAHVIAGIVILALVGWSAHPRVIQTGVAFWHMVDLVWVLLFPVIYLL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11572948; 12692562 [H]