Click here to switch to the map view.

The map label for this gene is 110678863

Identifier: 110678863

GI number: 110678863

Start: 1479401

End: 1479988

Strand: Direct

Name: 110678863

Synonym: RD1_1556

Alternate gene names: NA

Gene position: 1479401-1479988 (Clockwise)

Preceding gene: 110678862

Following gene: 110678872

Centisome position: 35.79

GC content: 59.69

Gene sequence:

>588_bases
ATGACTGCAAAGCTGAACGCTGTATTGGAAGCAATTGATGCGGCCAATCGCGCCGATCCGGTGCAGGAGCCTGATGACGC
TGGCGTAGATCAACCCGAGGCTTATCTTTACGGGCTGCGCATGACCTCTGAACTGGACCGTTTGTTTGGCGATCAGGCCA
GCGACGTGTTGCGCATCGCCGCGCGCGGTCAGCATATCGAACGCTGGATGCTCAAACGGGCGGAGTATCCCGAGGGCCGT
GCCGGATATCTGCAGTGGCGGCGCGATCAGGGGAAAGCGCATGGTGCGCGTCTGGGCGGGTTGATGAAAGACGCAGGCTA
CGACGCGGACTCTTGCGCGCGTGTGGGCGTCCTGCTGCGCAAAGAGGGCATCAAACGCGACGCCGAAGTGCAGCAGCTTG
AGGATGTAATCTGCTTTACCTTCCTCAAGTGGTATTTTGCGCCCTTCGCGGCCAAACACCCGGACGACAAGGTATTGGAT
ATCGTGGCTAAAACCGCGCGCAAGATGTCGTCGGATGCACGTGTGAGGGTTTTGGCGGAATTCGATCTGCCCGACCCTCT
GGCAGATGCGGTCAAGGCTGCGGCCTAG

Upstream 100 bases:

>100_bases
TATGGCGTGACGATCCAGAAAGATCATGCCATTATCGAGTCAGTCGAACGGCTGGCCCATTATGCAGATGAAGACCCGGC
CGAATCCTGGAGTGCGAAAA

Downstream 100 bases:

>100_bases
AGCATCCGACGAAATACCTGAAACACCAAGTATCACGTAACGCGTTGAAATTCTTGATTTCAGGCAGCGTTATGTGAGCG
GGGTTTTTCGCATGACGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Glutamate-TRNA Ligase

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MTAKLNAVLEAIDAANRADPVQEPDDAGVDQPEAYLYGLRMTSELDRLFGDQASDVLRIAARGQHIERWMLKRAEYPEGR
AGYLQWRRDQGKAHGARLGGLMKDAGYDADSCARVGVLLRKEGIKRDAEVQQLEDVICFTFLKWYFAPFAAKHPDDKVLD
IVAKTARKMSSDARVRVLAEFDLPDPLADAVKAAA

Sequences:

>Translated_195_residues
MTAKLNAVLEAIDAANRADPVQEPDDAGVDQPEAYLYGLRMTSELDRLFGDQASDVLRIAARGQHIERWMLKRAEYPEGR
AGYLQWRRDQGKAHGARLGGLMKDAGYDADSCARVGVLLRKEGIKRDAEVQQLEDVICFTFLKWYFAPFAAKHPDDKVLD
IVAKTARKMSSDARVRVLAEFDLPDPLADAVKAAA
>Mature_194_residues
TAKLNAVLEAIDAANRADPVQEPDDAGVDQPEAYLYGLRMTSELDRLFGDQASDVLRIAARGQHIERWMLKRAEYPEGRA
GYLQWRRDQGKAHGARLGGLMKDAGYDADSCARVGVLLRKEGIKRDAEVQQLEDVICFTFLKWYFAPFAAKHPDDKVLDI
VAKTARKMSSDARVRVLAEFDLPDPLADAVKAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21676; Mature: 21545

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAKLNAVLEAIDAANRADPVQEPDDAGVDQPEAYLYGLRMTSELDRLFGDQASDVLRIA
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ARGQHIERWMLKRAEYPEGRAGYLQWRRDQGKAHGARLGGLMKDAGYDADSCARVGVLLR
HCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
KEGIKRDAEVQQLEDVICFTFLKWYFAPFAAKHPDDKVLDIVAKTARKMSSDARVRVLAE
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEE
FDLPDPLADAVKAAA
CCCCCHHHHHHHHCC
>Mature Secondary Structure 
TAKLNAVLEAIDAANRADPVQEPDDAGVDQPEAYLYGLRMTSELDRLFGDQASDVLRIA
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ARGQHIERWMLKRAEYPEGRAGYLQWRRDQGKAHGARLGGLMKDAGYDADSCARVGVLLR
HCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
KEGIKRDAEVQQLEDVICFTFLKWYFAPFAAKHPDDKVLDIVAKTARKMSSDARVRVLAE
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEE
FDLPDPLADAVKAAA
CCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA