Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is bztB [H]

Identifier: 110678762

GI number: 110678762

Start: 1373768

End: 1374982

Strand: Direct

Name: bztB [H]

Synonym: RD1_1445

Alternate gene names: 110678762

Gene position: 1373768-1374982 (Clockwise)

Preceding gene: 110678761

Following gene: 110678763

Centisome position: 33.24

GC content: 55.8

Gene sequence:

>1215_bases
ATGACAATAATGACGGACCCACCGAGGGAGTCGTTCCGGCTATCCATGCTGCTGAACGACACGCGCTACCGGTCGATTAC
GTTTCAGGCGATCGCGCTTTTGGCCCTGATCGTGGCCATTGCCTATCTCGCGAACAATCTGTTTACCAATCTCGCCGCGC
AGGGCCTGAACATCTCATATGGGTTTCTGGGTGATCCGGCGGGCTATGACATCAACCAGCGTCTGATTGAATACGATAGC
CAATCCTCCAATGCGCGTGCGGCTCTCGTCGGTATCCTGAACACCCTGCTTGTGGCGTTTCTGGCCTGTATCATGGCGAC
TGTCTTTGGTGTGATCGCAGGGGTTTTGCGGCTGTCCAACAACTGGCTTGTTTCCAAGCTGATGTCTTTCTATGTCGAAA
TTTTCCGCAACATTCCCGTCCTGATCTGGATCATCATCATCTTTACGATCATGACCGCCGTGATGCCTGCCCCGCGCGCT
TTCCGGGGTGACGAACCCGAAGCGACGATGCTGCTGGGGGCCTTTGCCTTTACCAACCGCGGTATCTACATCCCTGCGCC
GATCTGGGGACCGGGGTCTATGGTCGTCGTTGCGACCTTTATTGCGTCGGTCGTGGGCGTCTTTGCCTATCGTCGCTACG
CCAAAAACCTGCTGTATCAAACGGGGCGTCTGTTGCCCATGGGATGGCCGAGCCTTGCCATCTTTTTCGTACCGACCATC
GTGATGTTTTTCATCATGGGGCGTCCCATCGGATTGGACATACCCGAGCTGGGTGGCTTCAACTTTCGGGGTGGTATCCA
GATTGGTGCACCGCTGATCGCGCTTTGGTTTGCCTTGTCCATCTACACCGGTGCTTTTATCGCTGAAAACGTGCGTGCGG
GTATTCAGGCCGTGTCCAAAGGCCAGACCGAAGCGGCATCCGCCCTCGGGCTGCATCCGGGACGCGTCATGAACCTTGTC
GTGCTACCGCAGGCCCTGCGCGTGATCATTCCGCCGCTCATTTCACATTACCTCAACATCACCAAGAACTCATCGCTGGC
GATTGCCGTGGGCTATGCGGATATCACTGCGACGCTTGGCGGCATTACCCTGAACCAGACCGGTCGCGCCATTGAATGCG
TGTTGCTGCTGATGCTGTTCTATCTTGTCATATCGCTGTCCATTTCGGCGATCATGAACGTCTACAACAAAACCGTCACC
CTGAAGGAGCGTTGA

Upstream 100 bases:

>100_bases
GCGCCCCTGGCACATTGGACGACCAACATAAAATCCCGGCAGGCCAGAGGCGCACAAGCGTCCACAAAGGCGAATAGCCG
GAACCACGGGGAAGACAATA

Downstream 100 bases:

>100_bases
TTGATGACCGATACAAACCAACACTCCGCTTCCTTTGTGCGCACGGAAACCATCCCCGAACGTGCTCCGCCTGTTACGGC
ATCCGGCCCGGTGAAATGGG

Product: glutamate/glutamine/aspartate/asparagine transport system permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MTIMTDPPRESFRLSMLLNDTRYRSITFQAIALLALIVAIAYLANNLFTNLAAQGLNISYGFLGDPAGYDINQRLIEYDS
QSSNARAALVGILNTLLVAFLACIMATVFGVIAGVLRLSNNWLVSKLMSFYVEIFRNIPVLIWIIIIFTIMTAVMPAPRA
FRGDEPEATMLLGAFAFTNRGIYIPAPIWGPGSMVVVATFIASVVGVFAYRRYAKNLLYQTGRLLPMGWPSLAIFFVPTI
VMFFIMGRPIGLDIPELGGFNFRGGIQIGAPLIALWFALSIYTGAFIAENVRAGIQAVSKGQTEAASALGLHPGRVMNLV
VLPQALRVIIPPLISHYLNITKNSSLAIAVGYADITATLGGITLNQTGRAIECVLLLMLFYLVISLSISAIMNVYNKTVT
LKER

Sequences:

>Translated_404_residues
MTIMTDPPRESFRLSMLLNDTRYRSITFQAIALLALIVAIAYLANNLFTNLAAQGLNISYGFLGDPAGYDINQRLIEYDS
QSSNARAALVGILNTLLVAFLACIMATVFGVIAGVLRLSNNWLVSKLMSFYVEIFRNIPVLIWIIIIFTIMTAVMPAPRA
FRGDEPEATMLLGAFAFTNRGIYIPAPIWGPGSMVVVATFIASVVGVFAYRRYAKNLLYQTGRLLPMGWPSLAIFFVPTI
VMFFIMGRPIGLDIPELGGFNFRGGIQIGAPLIALWFALSIYTGAFIAENVRAGIQAVSKGQTEAASALGLHPGRVMNLV
VLPQALRVIIPPLISHYLNITKNSSLAIAVGYADITATLGGITLNQTGRAIECVLLLMLFYLVISLSISAIMNVYNKTVT
LKER
>Mature_403_residues
TIMTDPPRESFRLSMLLNDTRYRSITFQAIALLALIVAIAYLANNLFTNLAAQGLNISYGFLGDPAGYDINQRLIEYDSQ
SSNARAALVGILNTLLVAFLACIMATVFGVIAGVLRLSNNWLVSKLMSFYVEIFRNIPVLIWIIIIFTIMTAVMPAPRAF
RGDEPEATMLLGAFAFTNRGIYIPAPIWGPGSMVVVATFIASVVGVFAYRRYAKNLLYQTGRLLPMGWPSLAIFFVPTIV
MFFIMGRPIGLDIPELGGFNFRGGIQIGAPLIALWFALSIYTGAFIAENVRAGIQAVSKGQTEAASALGLHPGRVMNLVV
LPQALRVIIPPLISHYLNITKNSSLAIAVGYADITATLGGITLNQTGRAIECVLLLMLFYLVISLSISAIMNVYNKTVTL
KER

Specific function: Part of a binding-protein-dependent transport system for glutamate, glutamine, aspartate and asparagine. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4597

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI48994930, Length=398, Percent_Identity=41.7085427135678, Blast_Score=281, Evalue=8e-77,
Organism=Escherichia coli, GI1786874, Length=169, Percent_Identity=34.3195266272189, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1786873, Length=126, Percent_Identity=34.9206349206349, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1788226, Length=140, Percent_Identity=31.4285714285714, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI87082239, Length=119, Percent_Identity=33.6134453781513, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1787030, Length=131, Percent_Identity=33.587786259542, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 44058; Mature: 43927

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIMTDPPRESFRLSMLLNDTRYRSITFQAIALLALIVAIAYLANNLFTNLAAQGLNISY
CCCCCCCCHHHHEEHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
GFLGDPAGYDINQRLIEYDSQSSNARAALVGILNTLLVAFLACIMATVFGVIAGVLRLSN
CCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NWLVSKLMSFYVEIFRNIPVLIWIIIIFTIMTAVMPAPRAFRGDEPEATMLLGAFAFTNR
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC
GIYIPAPIWGPGSMVVVATFIASVVGVFAYRRYAKNLLYQTGRLLPMGWPSLAIFFVPTI
CEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
VMFFIMGRPIGLDIPELGGFNFRGGIQIGAPLIALWFALSIYTGAFIAENVRAGIQAVSK
HHHHHHCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GQTEAASALGLHPGRVMNLVVLPQALRVIIPPLISHYLNITKNSSLAIAVGYADITATLG
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHC
GITLNQTGRAIECVLLLMLFYLVISLSISAIMNVYNKTVTLKER
CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC
>Mature Secondary Structure 
TIMTDPPRESFRLSMLLNDTRYRSITFQAIALLALIVAIAYLANNLFTNLAAQGLNISY
CCCCCCCHHHHEEHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
GFLGDPAGYDINQRLIEYDSQSSNARAALVGILNTLLVAFLACIMATVFGVIAGVLRLSN
CCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NWLVSKLMSFYVEIFRNIPVLIWIIIIFTIMTAVMPAPRAFRGDEPEATMLLGAFAFTNR
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC
GIYIPAPIWGPGSMVVVATFIASVVGVFAYRRYAKNLLYQTGRLLPMGWPSLAIFFVPTI
CEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
VMFFIMGRPIGLDIPELGGFNFRGGIQIGAPLIALWFALSIYTGAFIAENVRAGIQAVSK
HHHHHHCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GQTEAASALGLHPGRVMNLVVLPQALRVIIPPLISHYLNITKNSSLAIAVGYADITATLG
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHC
GITLNQTGRAIECVLLLMLFYLVISLSISAIMNVYNKTVTLKER
CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8809753 [H]