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The map label for this gene is 110678594

Identifier: 110678594

GI number: 110678594

Start: 1231656

End: 1232492

Strand: Reverse

Name: 110678594

Synonym: RD1_1269

Alternate gene names: NA

Gene position: 1232492-1231656 (Counterclockwise)

Preceding gene: 110678603

Following gene: 110678592

Centisome position: 29.82

GC content: 58.42

Gene sequence:

>837_bases
ATGGCTTATAAATCCATCTTCACTGCGCTTACTGCCTTTGATGAAACCTCACCGGCGCTGGCATTTTCAGCCGCAACCGC
CGAAGCACAGGACGCGCATCTTGAGGTGCTTTGTGTCGGGGTCGACCGCACACCGAACACCTATTTTGAAATCGGATCAA
ACGCGGTGGTGATGCATGCCGCGATCGAGACGGCGCATGAATCCGCGGAGCAAATTCAAGCCGCAGTGCGCGCATATCTG
CAAAACTCCATGTTGCGCTGGGATGTTCTGAACAGCGTCGCGCCAATCGCCAGTCTGGGGCGGACAGTGGCCACGCAGGC
CCGCTTTGCAGATCTTGCGATTGTAGGCCTGCCCTACGGCAAACCGACACAAACAGATGATTGCAGTATTCTCGAAGGCT
TCCTGTTTGAGGCCGATTGCCCGACGGTGGTCGTCCCCGAAGGCGCAGCCGTGGCAAAACCCCAAAGCATCGTGATCGGG
TGGAACGAAAGCACCGAAGCCCTGCGCGCCATCAAGGCGGCGATTCCCTACCTGCAAAAAGCCAAGCACATTCACATTGC
CATCATCGACCCGCCCGAAACCGGGCCGGAGCGCTCTGATCCCGGTGGCGCGCTCGCCGTCTATTTGTCGCGCCATGGTA
TAAAGTGCGACATCAATGTGATGACGCGCGCAGGGTTGAAGGTCAGCGAGCGGCTTTCGCAATATGTGACGGAAACCGGG
TCCGATCTGCTGGTTATGGGCGGATACGGTCACTCACGTTTCCGCGAAGCCGTTCTGGGTGGTGCCACCCGCGACATGCT
GGAGCACAGCAAGGTGCCGGTCATGATGGCACACTAG

Upstream 100 bases:

>100_bases
CTGCATCAACACGAGTCGAGATTTTAAATGATGCGGATCAAGGAAACCTCGTTCAGCCCCGTTAGGATAGCCGTGTTCCA
TGGCCAAAAAGGAGCGGAAC

Downstream 100 bases:

>100_bases
CCCTCGCGACCCGAGCGCATGTCAGCTCAGGATACCGCCATCGCTGTCATCCCCCGCCTCTTCCATGAGGCGGTCCATAT
CGGGCACCACGATGCGCCGC

Product: universal stress family protein, putative

Products: NA

Alternate protein names: UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family Protein; Universal Stress Protein Family; Universal Stress Family Protein; Universal Stress UspA Protein; Universal Stress Protein UspA Family UspA; UspA Stress Protein; UspA-Like Protein; Universal Stress Protein UspA Family; Universal Stress Response Protein; Universal Stress Protein Family Domain Protein; Universal Stress Protein UspA-Like; Universal Stress Related Protein

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MAYKSIFTALTAFDETSPALAFSAATAEAQDAHLEVLCVGVDRTPNTYFEIGSNAVVMHAAIETAHESAEQIQAAVRAYL
QNSMLRWDVLNSVAPIASLGRTVATQARFADLAIVGLPYGKPTQTDDCSILEGFLFEADCPTVVVPEGAAVAKPQSIVIG
WNESTEALRAIKAAIPYLQKAKHIHIAIIDPPETGPERSDPGGALAVYLSRHGIKCDINVMTRAGLKVSERLSQYVTETG
SDLLVMGGYGHSRFREAVLGGATRDMLEHSKVPVMMAH

Sequences:

>Translated_278_residues
MAYKSIFTALTAFDETSPALAFSAATAEAQDAHLEVLCVGVDRTPNTYFEIGSNAVVMHAAIETAHESAEQIQAAVRAYL
QNSMLRWDVLNSVAPIASLGRTVATQARFADLAIVGLPYGKPTQTDDCSILEGFLFEADCPTVVVPEGAAVAKPQSIVIG
WNESTEALRAIKAAIPYLQKAKHIHIAIIDPPETGPERSDPGGALAVYLSRHGIKCDINVMTRAGLKVSERLSQYVTETG
SDLLVMGGYGHSRFREAVLGGATRDMLEHSKVPVMMAH
>Mature_277_residues
AYKSIFTALTAFDETSPALAFSAATAEAQDAHLEVLCVGVDRTPNTYFEIGSNAVVMHAAIETAHESAEQIQAAVRAYLQ
NSMLRWDVLNSVAPIASLGRTVATQARFADLAIVGLPYGKPTQTDDCSILEGFLFEADCPTVVVPEGAAVAKPQSIVIGW
NESTEALRAIKAAIPYLQKAKHIHIAIIDPPETGPERSDPGGALAVYLSRHGIKCDINVMTRAGLKVSERLSQYVTETGS
DLLVMGGYGHSRFREAVLGGATRDMLEHSKVPVMMAH

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29779; Mature: 29648

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYKSIFTALTAFDETSPALAFSAATAEAQDAHLEVLCVGVDRTPNTYFEIGSNAVVMHA
CCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCEEEECCCEEEEHH
AIETAHESAEQIQAAVRAYLQNSMLRWDVLNSVAPIASLGRTVATQARFADLAIVGLPYG
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCC
KPTQTDDCSILEGFLFEADCPTVVVPEGAAVAKPQSIVIGWNESTEALRAIKAAIPYLQK
CCCCCCCHHHHHHHEEECCCCEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHC
AKHIHIAIIDPPETGPERSDPGGALAVYLSRHGIKCDINVMTRAGLKVSERLSQYVTETG
CCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEEHCCCCCHHHHHHHHHHHCCC
SDLLVMGGYGHSRFREAVLGGATRDMLEHSKVPVMMAH
CCEEEECCCCHHHHHHHHHCCHHHHHHHHCCCCEEECC
>Mature Secondary Structure 
AYKSIFTALTAFDETSPALAFSAATAEAQDAHLEVLCVGVDRTPNTYFEIGSNAVVMHA
CHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCEEEECCCEEEEHH
AIETAHESAEQIQAAVRAYLQNSMLRWDVLNSVAPIASLGRTVATQARFADLAIVGLPYG
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCC
KPTQTDDCSILEGFLFEADCPTVVVPEGAAVAKPQSIVIGWNESTEALRAIKAAIPYLQK
CCCCCCCHHHHHHHEEECCCCEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHC
AKHIHIAIIDPPETGPERSDPGGALAVYLSRHGIKCDINVMTRAGLKVSERLSQYVTETG
CCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEEHCCCCCHHHHHHHHHHHCCC
SDLLVMGGYGHSRFREAVLGGATRDMLEHSKVPVMMAH
CCEEEECCCCHHHHHHHHHCCHHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA