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The map label for this gene is 110678527

Identifier: 110678527

GI number: 110678527

Start: 1161547

End: 1162359

Strand: Direct

Name: 110678527

Synonym: RD1_1198

Alternate gene names: NA

Gene position: 1161547-1162359 (Clockwise)

Preceding gene: 110678526

Following gene: 110678528

Centisome position: 28.1

GC content: 60.52

Gene sequence:

>813_bases
ATGCTCCGTAACGCACTTCTGGCAAGTTGTTGTGGCGTTGTCTTGTGCTTCGCCGCTTGGGCGGACGTTATTGTACCGCC
GAGCGAAGCCTTCGAAGCGGATGTCGTGTTTCTAGGTGAGCAGCACGACAACCTGACGCACCACGAGGTTCAGGCGTCGT
GGGTTGAGCAGTTGAGCGCAAGCGCGCTCGTGTTCGAAATGTTGACACGCGCGCAGGCGTCAAAAATCACCCCTGACAAC
AGGGTCGATCAGGCCACCCTGGGGGACGTGCTGGACTGGCAAGCATCCGGTTGGCCCGATTTTTCAATGTATTATCCGAT
ATTTGCCGCAGCGCCCGAGGCGCCGGTTTTTGGCGCTGGTGTGCCGCGCGCCCAGTTGCGCGAGGTGATGAACGGGGACG
TTGCCAGTCTCCTCGGGACCGACACCGCACAGCGCTTGGGCCTCGATCAGCCTTTGCCAGCCGCGCAGCAAACAGTGCGT
GAGGCGTTGCAGCGCAGTGCCCATTGTGATGCCCTGCCCGAGGAATTGCTGCCCAAGATGGTCGATGTCCAGCGGTTGCG
TGACGCGGCCCTCGCGCAGGCTGCGCTGCAGGCTTACGAACAGTTTGGTGGTCCTGTTATTGTGATCACCGGCAATGGCC
ATGCGCGCGCCGATTGGGGCGCGCCGTTTATCCTTGGTCAAGCCGCACCCGATCTTTCAGTTTTCAGCCTTGGAAAAGGG
GAAGCCGGCCGCATGCCTGATGGATCATTCACCTCAGTTGTGGATGGCCCAGCGGTGGATCGCGGCAGTCCCTGTGATGC
CTTCGCAAAGTAA

Upstream 100 bases:

>100_bases
TCAGCAAGGAACGCGTGCGCCAGCTTGAGGCCGCAGCCTTCGGGAAAATGCGCAAGAGCCTTGAAAATCAATCCCGCGAG
GTTTTGTATTTCCTCGACTG

Downstream 100 bases:

>100_bases
TCCGGGCTGGTGGAAATCAGCGTCTCGCCTTAAAGTCACCCCGTCAGGTTTCACGATCAAAGGTCCAAGATGCTGAGCGA
TAAACACATTCTGCTGATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MLRNALLASCCGVVLCFAAWADVIVPPSEAFEADVVFLGEQHDNLTHHEVQASWVEQLSASALVFEMLTRAQASKITPDN
RVDQATLGDVLDWQASGWPDFSMYYPIFAAAPEAPVFGAGVPRAQLREVMNGDVASLLGTDTAQRLGLDQPLPAAQQTVR
EALQRSAHCDALPEELLPKMVDVQRLRDAALAQAALQAYEQFGGPVIVITGNGHARADWGAPFILGQAAPDLSVFSLGKG
EAGRMPDGSFTSVVDGPAVDRGSPCDAFAK

Sequences:

>Translated_270_residues
MLRNALLASCCGVVLCFAAWADVIVPPSEAFEADVVFLGEQHDNLTHHEVQASWVEQLSASALVFEMLTRAQASKITPDN
RVDQATLGDVLDWQASGWPDFSMYYPIFAAAPEAPVFGAGVPRAQLREVMNGDVASLLGTDTAQRLGLDQPLPAAQQTVR
EALQRSAHCDALPEELLPKMVDVQRLRDAALAQAALQAYEQFGGPVIVITGNGHARADWGAPFILGQAAPDLSVFSLGKG
EAGRMPDGSFTSVVDGPAVDRGSPCDAFAK
>Mature_270_residues
MLRNALLASCCGVVLCFAAWADVIVPPSEAFEADVVFLGEQHDNLTHHEVQASWVEQLSASALVFEMLTRAQASKITPDN
RVDQATLGDVLDWQASGWPDFSMYYPIFAAAPEAPVFGAGVPRAQLREVMNGDVASLLGTDTAQRLGLDQPLPAAQQTVR
EALQRSAHCDALPEELLPKMVDVQRLRDAALAQAALQAYEQFGGPVIVITGNGHARADWGAPFILGQAAPDLSVFSLGKG
EAGRMPDGSFTSVVDGPAVDRGSPCDAFAK

Specific function: Unknown

COG id: COG3016

COG function: function code S; Uncharacterized iron-regulated protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28727; Mature: 28727

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRNALLASCCGVVLCFAAWADVIVPPSEAFEADVVFLGEQHDNLTHHEVQASWVEQLSA
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHH
SALVFEMLTRAQASKITPDNRVDQATLGDVLDWQASGWPDFSMYYPIFAAAPEAPVFGAG
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCC
VPRAQLREVMNGDVASLLGTDTAQRLGLDQPLPAAQQTVREALQRSAHCDALPEELLPKM
CCHHHHHHHHCCHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
VDVQRLRDAALAQAALQAYEQFGGPVIVITGNGHARADWGAPFILGQAAPDLSVFSLGKG
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEECCCCCCCEEEECCCC
EAGRMPDGSFTSVVDGPAVDRGSPCDAFAK
CCCCCCCCCCHHCCCCCCCCCCCCCHHCCC
>Mature Secondary Structure
MLRNALLASCCGVVLCFAAWADVIVPPSEAFEADVVFLGEQHDNLTHHEVQASWVEQLSA
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHH
SALVFEMLTRAQASKITPDNRVDQATLGDVLDWQASGWPDFSMYYPIFAAAPEAPVFGAG
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCC
VPRAQLREVMNGDVASLLGTDTAQRLGLDQPLPAAQQTVREALQRSAHCDALPEELLPKM
CCHHHHHHHHCCHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
VDVQRLRDAALAQAALQAYEQFGGPVIVITGNGHARADWGAPFILGQAAPDLSVFSLGKG
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEECCCCCCCEEEECCCC
EAGRMPDGSFTSVVDGPAVDRGSPCDAFAK
CCCCCCCCCCHHCCCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA