| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is cysE [H]
Identifier: 110678464
GI number: 110678464
Start: 1093480
End: 1094286
Strand: Reverse
Name: cysE [H]
Synonym: RD1_1129
Alternate gene names: 110678464
Gene position: 1094286-1093480 (Counterclockwise)
Preceding gene: 110678465
Following gene: 110678460
Centisome position: 26.48
GC content: 60.59
Gene sequence:
>807_bases ATGGCGCACGACCGACAAAAGCGCACCCTTGGGGAGTTCTGGTCCGTCCTGCGAGAAGAAGCCGAAATCGTGGTGCGATC CGAACCCTTCTTGGCCCCGGTCCTGCAAAACGCAGTTCTGCGCTGGAACGCCTTTTCTGACGCGCTCGCCCGGCGGCTCT GTGACGCCCTTGGCTGTCATGAGGTCGCCCGCGACACTTACGGTGCGCTGTTCTCGGACACCATCAAGGCTGATCCAACG ATTTCGACCGCGGCGGCACAGGATCTTTTCGCGATTTACAGCGGTGATCCGGCGAGCCTGACATTTGTCCAGGCCTTTCT CAGTCACAAGGCGTTCCACGCTGTGCAGATGCATCGCATTGCCCACCGTCTTTGGCTGGACGACCGGCGCGAACTTGCGC TTTGGCTGATGAACCGCGCATCAATGACCTTGGGTCCCGACATTCATCCGGCTGCCCGGCTCGGGGTTGGATTGATGTTG GATCATGGGGCAGGAATCGTGATCGGCGAAACCGCCGTTGTCGAAGACCATGTCACAATCCTGCAAAACGTGACGCTGGG TGGCACGGGAAAAATCCGGGGAGATCGCCATCCCAAGGTACGGCAGGGCGTGATGATCGGTGCTGGGGCAAAAATTATCG GCAACATCGAAATCGGCGCGTTCAGCAAGGTCGGCGCGGGCAGTGTCGTGCTGAAAGATGTGCCTGCGCGGTGTACAGTG GCCGGGGTTCCAGCCCGGGTCGTGCGCCTCCACCCGCAGAGCACCCCGGATGCGGGGACAGCCCGGTACTTTCAGACTGA GCATTAA
Upstream 100 bases:
>100_bases CCGCTTTGATCCTCGTCATTCTGGGTCTTTTTGTCCAAGCTACGGATGCCGCCAACGCACCAAAAGCCAATCACCAAACC CATGCGCGAAGGGACTGAGC
Downstream 100 bases:
>100_bases AGCGTCATGCGAAAAACCTGAATCACATGACGCATTGACATCCGTCATCTCAGACAATGATTAGTCGGTCAGGTTTCTCG CACCGGGCTTCAGGCAACAC
Product: serine acetyltransferase
Products: NA
Alternate protein names: SAT [H]
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MAHDRQKRTLGEFWSVLREEAEIVVRSEPFLAPVLQNAVLRWNAFSDALARRLCDALGCHEVARDTYGALFSDTIKADPT ISTAAAQDLFAIYSGDPASLTFVQAFLSHKAFHAVQMHRIAHRLWLDDRRELALWLMNRASMTLGPDIHPAARLGVGLML DHGAGIVIGETAVVEDHVTILQNVTLGGTGKIRGDRHPKVRQGVMIGAGAKIIGNIEIGAFSKVGAGSVVLKDVPARCTV AGVPARVVRLHPQSTPDAGTARYFQTEH
Sequences:
>Translated_268_residues MAHDRQKRTLGEFWSVLREEAEIVVRSEPFLAPVLQNAVLRWNAFSDALARRLCDALGCHEVARDTYGALFSDTIKADPT ISTAAAQDLFAIYSGDPASLTFVQAFLSHKAFHAVQMHRIAHRLWLDDRRELALWLMNRASMTLGPDIHPAARLGVGLML DHGAGIVIGETAVVEDHVTILQNVTLGGTGKIRGDRHPKVRQGVMIGAGAKIIGNIEIGAFSKVGAGSVVLKDVPARCTV AGVPARVVRLHPQSTPDAGTARYFQTEH >Mature_267_residues AHDRQKRTLGEFWSVLREEAEIVVRSEPFLAPVLQNAVLRWNAFSDALARRLCDALGCHEVARDTYGALFSDTIKADPTI STAAAQDLFAIYSGDPASLTFVQAFLSHKAFHAVQMHRIAHRLWLDDRRELALWLMNRASMTLGPDIHPAARLGVGLMLD HGAGIVIGETAVVEDHVTILQNVTLGGTGKIRGDRHPKVRQGVMIGAGAKIIGNIEIGAFSKVGAGSVVLKDVPARCTVA GVPARVVRLHPQSTPDAGTARYFQTEH
Specific function: Cysteine biosynthesis. [C]
COG id: COG1045
COG function: function code E; Serine acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1790035, Length=252, Percent_Identity=46.031746031746, Blast_Score=222, Evalue=2e-59, Organism=Escherichia coli, GI1788371, Length=104, Percent_Identity=39.4230769230769, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018357 - InterPro: IPR010493 - InterPro: IPR005881 - InterPro: IPR011004 [H]
Pfam domain/function: PF06426 SATase_N [H]
EC number: =2.3.1.30 [H]
Molecular weight: Translated: 29093; Mature: 28962
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHDRQKRTLGEFWSVLREEAEIVVRSEPFLAPVLQNAVLRWNAFSDALARRLCDALGCH CCCCHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH EVARDTYGALFSDTIKADPTISTAAAQDLFAIYSGDPASLTFVQAFLSHKAFHAVQMHRI HHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH AHRLWLDDRRELALWLMNRASMTLGPDIHPAARLGVGLMLDHGAGIVIGETAVVEDHVTI HHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCEEEEEECCCCEEECCCEEHHHHHHH LQNVTLGGTGKIRGDRHPKVRQGVMIGAGAKIIGNIEIGAFSKVGAGSVVLKDVPARCTV HHHCCCCCCCCCCCCCCCHHHCCEEEECCCEEEEEEEECCCCCCCCCCEEEECCCCCEEE AGVPARVVRLHPQSTPDAGTARYFQTEH ECCCEEEEEECCCCCCCCCCCCCEECCC >Mature Secondary Structure AHDRQKRTLGEFWSVLREEAEIVVRSEPFLAPVLQNAVLRWNAFSDALARRLCDALGCH CCCHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH EVARDTYGALFSDTIKADPTISTAAAQDLFAIYSGDPASLTFVQAFLSHKAFHAVQMHRI HHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH AHRLWLDDRRELALWLMNRASMTLGPDIHPAARLGVGLMLDHGAGIVIGETAVVEDHVTI HHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCEEEEEECCCCEEECCCEEHHHHHHH LQNVTLGGTGKIRGDRHPKVRQGVMIGAGAKIIGNIEIGAFSKVGAGSVVLKDVPARCTV HHHCCCCCCCCCCCCCCCHHHCCEEEECCCEEEEEEEECCCCCCCCCCEEEECCCCCEEE AGVPARVVRLHPQSTPDAGTARYFQTEH ECCCEEEEEECCCCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]