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The map label for this gene is 110678465

Identifier: 110678465

GI number: 110678465

Start: 1094289

End: 1095221

Strand: Reverse

Name: 110678465

Synonym: RD1_1130

Alternate gene names: NA

Gene position: 1095221-1094289 (Counterclockwise)

Preceding gene: 110678466

Following gene: 110678464

Centisome position: 26.5

GC content: 60.56

Gene sequence:

>933_bases
ATGCAGCGGAAGCTATACAAAAACCGGGAAGTGCTCGCAGGTTACGGCTGGATGTCGGTCGCTGTCTTGATATGGGCCAG
TTGGCTCGTTCTTACGTCCAGCGGGCGCGTGACCGCGCTGTCCGTTGTGGACCTCGCCTGGTTTCGCGCGGCAATTCCGG
CGGCGGTCCTCCTCCCCGTTCTCTGGCGTAACCGGGAGCATGTTGCACGGCTTGGGGTGAAACGCTGTGTGCTACTGTCG
GCCTATGGCGCGCCGTTCACCTTATGCGTCGGATATGGTCTCACCTTTGCACCGGTCGCGCATGCCGGTGCGATGGTCCC
GGGCCTCATGCCCGTCTTTGCGATTGCCCTTGGGGCGATCTTCTTGGGGCAACGCATCTCGCCCCGGAAAGCTGTGGCAA
GCCTTTTCATTCTTTCGGGCACCGGGGTGATCCTGTGGTACACATCAAGTGCCCCTGAGGGCGACGCGGTTTGGGTCGGG
CACGTGCTTTTTCTGCTGGGTGCACTTTGTTGGGCCTGTTTTGCCGTGACGCTCGGGCGATCTGACGTCGGACCTTTCGT
GGCAACGGCCATTGTCGCAGCCCTGTCGGTCTTGGTGCTGACACCGATCTTGGCGTTCCCCGGTGTATCGCAGATCAGCA
GCGCCGACCTCCGCGATGTTACTTTTCAGGCAGTGTTCCAGGGTGTTTTGGCTGGCCTTGTGTCTCTCTTTGCCTTTGGC
CGCGCGCTTCAACTTATCGGAAGCAGGGCCGCAGCACTGACCGCGCTCACACCGGGCATTGCGGCTGTGTTGGCAATTCC
GGTTCTCGACCAATTCCCGCACGGCGCTGAGGCTGCCGCTTTGATCCTCGTCATTCTGGGTCTTTTTGTCCAAGCTACGG
ATGCCGCCAACGCACCAAAAGCCAATCACCAAACCCATGCGCGAAGGGACTGA

Upstream 100 bases:

>100_bases
TTCGCGCAGCGCAAGGCTGATCGCGCTATCCAGACCTTCAGTCAGAAACGGCATATGTCGGTGCGCTCCAACGCGCGCCG
GCGTCTACGCGGGGGGCTTT

Downstream 100 bases:

>100_bases
GCATGGCGCACGACCGACAAAAGCGCACCCTTGGGGAGTTCTGGTCCGTCCTGCGAGAAGAAGCCGAAATCGTGGTGCGA
TCCGAACCCTTCTTGGCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MQRKLYKNREVLAGYGWMSVAVLIWASWLVLTSSGRVTALSVVDLAWFRAAIPAAVLLPVLWRNREHVARLGVKRCVLLS
AYGAPFTLCVGYGLTFAPVAHAGAMVPGLMPVFAIALGAIFLGQRISPRKAVASLFILSGTGVILWYTSSAPEGDAVWVG
HVLFLLGALCWACFAVTLGRSDVGPFVATAIVAALSVLVLTPILAFPGVSQISSADLRDVTFQAVFQGVLAGLVSLFAFG
RALQLIGSRAAALTALTPGIAAVLAIPVLDQFPHGAEAAALILVILGLFVQATDAANAPKANHQTHARRD

Sequences:

>Translated_310_residues
MQRKLYKNREVLAGYGWMSVAVLIWASWLVLTSSGRVTALSVVDLAWFRAAIPAAVLLPVLWRNREHVARLGVKRCVLLS
AYGAPFTLCVGYGLTFAPVAHAGAMVPGLMPVFAIALGAIFLGQRISPRKAVASLFILSGTGVILWYTSSAPEGDAVWVG
HVLFLLGALCWACFAVTLGRSDVGPFVATAIVAALSVLVLTPILAFPGVSQISSADLRDVTFQAVFQGVLAGLVSLFAFG
RALQLIGSRAAALTALTPGIAAVLAIPVLDQFPHGAEAAALILVILGLFVQATDAANAPKANHQTHARRD
>Mature_310_residues
MQRKLYKNREVLAGYGWMSVAVLIWASWLVLTSSGRVTALSVVDLAWFRAAIPAAVLLPVLWRNREHVARLGVKRCVLLS
AYGAPFTLCVGYGLTFAPVAHAGAMVPGLMPVFAIALGAIFLGQRISPRKAVASLFILSGTGVILWYTSSAPEGDAVWVG
HVLFLLGALCWACFAVTLGRSDVGPFVATAIVAALSVLVLTPILAFPGVSQISSADLRDVTFQAVFQGVLAGLVSLFAFG
RALQLIGSRAAALTALTPGIAAVLAIPVLDQFPHGAEAAALILVILGLFVQATDAANAPKANHQTHARRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32561; Mature: 32561

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRKLYKNREVLAGYGWMSVAVLIWASWLVLTSSGRVTALSVVDLAWFRAAIPAAVLLPV
CCCCHHCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
LWRNREHVARLGVKRCVLLSAYGAPFTLCVGYGLTFAPVAHAGAMVPGLMPVFAIALGAI
HHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FLGQRISPRKAVASLFILSGTGVILWYTSSAPEGDAVWVGHVLFLLGALCWACFAVTLGR
HHCCCCCHHHHHHHHHHEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
SDVGPFVATAIVAALSVLVLTPILAFPGVSQISSADLRDVTFQAVFQGVLAGLVSLFAFG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RALQLIGSRAAALTALTPGIAAVLAIPVLDQFPHGAEAAALILVILGLFVQATDAANAPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
ANHQTHARRD
CCCCCCCCCC
>Mature Secondary Structure
MQRKLYKNREVLAGYGWMSVAVLIWASWLVLTSSGRVTALSVVDLAWFRAAIPAAVLLPV
CCCCHHCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
LWRNREHVARLGVKRCVLLSAYGAPFTLCVGYGLTFAPVAHAGAMVPGLMPVFAIALGAI
HHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FLGQRISPRKAVASLFILSGTGVILWYTSSAPEGDAVWVGHVLFLLGALCWACFAVTLGR
HHCCCCCHHHHHHHHHHEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
SDVGPFVATAIVAALSVLVLTPILAFPGVSQISSADLRDVTFQAVFQGVLAGLVSLFAFG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RALQLIGSRAAALTALTPGIAAVLAIPVLDQFPHGAEAAALILVILGLFVQATDAANAPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
ANHQTHARRD
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA