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The map label for this gene is 110678392

Identifier: 110678392

GI number: 110678392

Start: 1013188

End: 1013682

Strand: Reverse

Name: 110678392

Synonym: RD1_1051

Alternate gene names: NA

Gene position: 1013682-1013188 (Counterclockwise)

Preceding gene: 110678393

Following gene: 110678391

Centisome position: 24.53

GC content: 58.38

Gene sequence:

>495_bases
ATGCAGCGGATAGAACGGATCATCGTGGGTTTGGCCAGCGTCGGTGTCGGGCTGTCCTTTTTCGTTCTCATCTGTGCCGT
CCTGACACAGGTTCTGGGGCGCACATTCGGATCATCCCCCGTCTGGACCGAAGAGCTGACGCGCTACGCGATGCTGTATA
CCGTGACCTTCGGGGCCGGACTGTCCCTGCGCTCCGGTGATCTGGTGAATGTAGACGTCGTCTGCGAAGCGCTCCCGGGC
AAGGGGCCATGGCTGTTGCGACTGTTGTCTGCGAGCGCAACGCTCATCCTCTGCGTAATCCTGATCCCTGCGGCATGGAA
ATATGTGTCCATCGGGGCCTTTCAAACCTCGCCCGCCTTGGGCGTGCGCATGGATTACATCCATTTTTCAGTTCTCGCAT
TGCTCGCCTGCCTTGCGGTTTTTGCCCTGCTGAGGATCGTTTCGATGCTCTTTTTTGCCGGCACGGGTGAGCCGGTCAAA
CGTATGGATAGCTGA

Upstream 100 bases:

>100_bases
GCCCCATCGTGGAATCGCTGTTCTCTGAATAAAACGCCCGCGAGAGCCGTCGGTCATCGACCCGGCGGCTCTTGCACCTA
TTTTAATGAAAGTCTGACGG

Downstream 100 bases:

>100_bases
CCATGGGCCTCACTGTTCTTATTGCCGTTTTCGTCATCGGTCTTGTCGTGGGCATCCCCGTGGCCATCACTCTCGGCCTG
AGCTCCCTCTGCTATCTGCT

Product: TRAP dicarboxylate transporter, DctQ subunit, putative

Products: NA

Alternate protein names: TRAP Dicarboxylate Transporter DctQ Subunit; TRAP Dicarboxylate Transporter; Trap Dicarboxylate Transporter Dctq Subunit; TRAP Transporter DctQ-Like Membrane Protein

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MQRIERIIVGLASVGVGLSFFVLICAVLTQVLGRTFGSSPVWTEELTRYAMLYTVTFGAGLSLRSGDLVNVDVVCEALPG
KGPWLLRLLSASATLILCVILIPAAWKYVSIGAFQTSPALGVRMDYIHFSVLALLACLAVFALLRIVSMLFFAGTGEPVK
RMDS

Sequences:

>Translated_164_residues
MQRIERIIVGLASVGVGLSFFVLICAVLTQVLGRTFGSSPVWTEELTRYAMLYTVTFGAGLSLRSGDLVNVDVVCEALPG
KGPWLLRLLSASATLILCVILIPAAWKYVSIGAFQTSPALGVRMDYIHFSVLALLACLAVFALLRIVSMLFFAGTGEPVK
RMDS
>Mature_164_residues
MQRIERIIVGLASVGVGLSFFVLICAVLTQVLGRTFGSSPVWTEELTRYAMLYTVTFGAGLSLRSGDLVNVDVVCEALPG
KGPWLLRLLSASATLILCVILIPAAWKYVSIGAFQTSPALGVRMDYIHFSVLALLACLAVFALLRIVSMLFFAGTGEPVK
RMDS

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17672; Mature: 17672

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRIERIIVGLASVGVGLSFFVLICAVLTQVLGRTFGSSPVWTEELTRYAMLYTVTFGAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
LSLRSGDLVNVDVVCEALPGKGPWLLRLLSASATLILCVILIPAAWKYVSIGAFQTSPAL
CEECCCCEEEHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC
GVRMDYIHFSVLALLACLAVFALLRIVSMLFFAGTGEPVKRMDS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCC
>Mature Secondary Structure
MQRIERIIVGLASVGVGLSFFVLICAVLTQVLGRTFGSSPVWTEELTRYAMLYTVTFGAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
LSLRSGDLVNVDVVCEALPGKGPWLLRLLSASATLILCVILIPAAWKYVSIGAFQTSPAL
CEECCCCEEEHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC
GVRMDYIHFSVLALLACLAVFALLRIVSMLFFAGTGEPVKRMDS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA