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The map label for this gene is recR

Identifier: 110678387

GI number: 110678387

Start: 1007851

End: 1008444

Strand: Reverse

Name: recR

Synonym: RD1_1045

Alternate gene names: 110678387

Gene position: 1008444-1007851 (Counterclockwise)

Preceding gene: 110678388

Following gene: 110678384

Centisome position: 24.4

GC content: 61.62

Gene sequence:

>594_bases
GTGAGCAGCACAAAGGATATTGACGCGTTAATCGACCTGATGGCCAAGCTGCCCGGGCTTGGGCCAAGGTCTGCGCGCCG
TACCGTGCTGCACCTCATCCGGAAACGCAGCCTGCTGCTCATCCCGCTGGCAGACACGCTGCAAACGGTCGCCGAGACGG
CCCGCGAATGTCTGAACTGCGGCAATGTCGGCACGACGGATGTATGTGACATTTGCACCTGTGAAAAACGCGCCAATGGG
GAACTCTGCGTGGTCGAGGATGTTGCCGACCTCTGGGCGATGGAGCGGTCCGGGATTTTCAAAGGGCGCTATCACGTTTT
GGGCGGCACACTGTCCGCGCTGGACGCGGTCGGCCCGCAGGAATTGCGCATTCCCCGTCTGCTGGACCGTGTTCCCAGCG
AAGGGATCACCGAGGTGATCCTCGCCCTGAACGCAACGATCGACGGCCAGACGACCGCCCATTACATCGCCGACAACCTC
GAAGGTCAGGTCCGCCTCACGTCATTGGCGCAAGGCGTTCCGATCGGTGGGGAGTTGGATTACCTTGACGACGGCACGAT
CACCGCAGCGATGCGCGCGCGGAAATCCTTTTAG

Upstream 100 bases:

>100_bases
CCGAAGGCATGGGCTTGCCAGCGGATATGAAGCTGCCGTTCTGAGCCCCCCTTCGCCGCAGACAACCGCCCGCGCGGCCC
CCGCAAAACAGGCATGATGT

Downstream 100 bases:

>100_bases
AGCGTCTGACGAAATACCACAAACATCAGGTATCACGTAACGCGTTGAAACCCTTGATTTCAGGCATCGCTCACGTGCTT
CAGGTTTTTCGCATGACGCT

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MSSTKDIDALIDLMAKLPGLGPRSARRTVLHLIRKRSLLLIPLADTLQTVAETARECLNCGNVGTTDVCDICTCEKRANG
ELCVVEDVADLWAMERSGIFKGRYHVLGGTLSALDAVGPQELRIPRLLDRVPSEGITEVILALNATIDGQTTAHYIADNL
EGQVRLTSLAQGVPIGGELDYLDDGTITAAMRARKSF

Sequences:

>Translated_197_residues
MSSTKDIDALIDLMAKLPGLGPRSARRTVLHLIRKRSLLLIPLADTLQTVAETARECLNCGNVGTTDVCDICTCEKRANG
ELCVVEDVADLWAMERSGIFKGRYHVLGGTLSALDAVGPQELRIPRLLDRVPSEGITEVILALNATIDGQTTAHYIADNL
EGQVRLTSLAQGVPIGGELDYLDDGTITAAMRARKSF
>Mature_196_residues
SSTKDIDALIDLMAKLPGLGPRSARRTVLHLIRKRSLLLIPLADTLQTVAETARECLNCGNVGTTDVCDICTCEKRANGE
LCVVEDVADLWAMERSGIFKGRYHVLGGTLSALDAVGPQELRIPRLLDRVPSEGITEVILALNATIDGQTTAHYIADNLE
GQVRLTSLAQGVPIGGELDYLDDGTITAAMRARKSF

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=199, Percent_Identity=38.1909547738693, Blast_Score=143, Evalue=6e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_ROSDO (Q16BD5)

Other databases:

- EMBL:   CP000362
- RefSeq:   YP_681394.1
- ProteinModelPortal:   Q16BD5
- SMR:   Q16BD5
- STRING:   Q16BD5
- GeneID:   4198289
- GenomeReviews:   CP000362_GR
- KEGG:   rde:RD1_1045
- NMPDR:   fig|375451.6.peg.978
- eggNOG:   COG0353
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- PhylomeDB:   Q16BD5
- ProtClustDB:   PRK00076
- BioCyc:   RDEN375451:RD1_1045-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21230; Mature: 21099

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS01300 RECR; PS00022 EGF_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTKDIDALIDLMAKLPGLGPRSARRTVLHLIRKRSLLLIPLADTLQTVAETARECLNC
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHC
GNVGTTDVCDICTCEKRANGELCVVEDVADLWAMERSGIFKGRYHVLGGTLSALDAVGPQ
CCCCCCCHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHCCCHH
ELRIPRLLDRVPSEGITEVILALNATIDGQTTAHYIADNLEGQVRLTSLAQGVPIGGELD
HCCHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEHHHCCCCCCCCCC
YLDDGTITAAMRARKSF
CCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SSTKDIDALIDLMAKLPGLGPRSARRTVLHLIRKRSLLLIPLADTLQTVAETARECLNC
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHC
GNVGTTDVCDICTCEKRANGELCVVEDVADLWAMERSGIFKGRYHVLGGTLSALDAVGPQ
CCCCCCCHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHCCCHH
ELRIPRLLDRVPSEGITEVILALNATIDGQTTAHYIADNLEGQVRLTSLAQGVPIGGELD
HCCHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEHHHCCCCCCCCCC
YLDDGTITAAMRARKSF
CCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA