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The map label for this gene is ybaB [C]

Identifier: 110678388

GI number: 110678388

Start: 1008501

End: 1008845

Strand: Reverse

Name: ybaB [C]

Synonym: RD1_1046

Alternate gene names: 110678388

Gene position: 1008845-1008501 (Counterclockwise)

Preceding gene: 110678389

Following gene: 110678387

Centisome position: 24.41

GC content: 55.36

Gene sequence:

>345_bases
ATGCTCAAAGGACTAGGTTCACTCGGCGATATGGCCGGCATGATGAAAAAAGCGCAGGAAATGCAGGCCAAGATGGCGCA
GATGCAGGAAGACATGCAAAATGTGATCGTCGAAGGTGTTTCCGGCGCGGGTCTGGTCAAAGCCACCTGCACCGCCAAGG
GCGAGTTGAAAGGTCTGGACATTGACCCGTCGATCTTCAACAGCGACGATAAGGAAGTCGTCGAAGACCTGATCCTTGCC
GCGATCAAGGATGCGCAAACCAAGGCCGCCGAAAAGGCGCAGGAAGAAATGGCGAAGCTGACCGAAGGCATGGGCTTGCC
AGCGGATATGAAGCTGCCGTTCTGA

Upstream 100 bases:

>100_bases
TCGAAGACGAGTGGGACCCCTTCGAGGACAGTTGAGCCCCTTGCGAGGGCGCCTCAAAACACGCATATCAAACGTAACGG
ATCACATAAGGACACAGCAG

Downstream 100 bases:

>100_bases
GCCCCCCTTCGCCGCAGACAACCGCCCGCGCGGCCCCCGCAAAACAGGCATGATGTGTGAGCAGCACAAAGGATATTGAC
GCGTTAATCGACCTGATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MLKGLGSLGDMAGMMKKAQEMQAKMAQMQEDMQNVIVEGVSGAGLVKATCTAKGELKGLDIDPSIFNSDDKEVVEDLILA
AIKDAQTKAAEKAQEEMAKLTEGMGLPADMKLPF

Sequences:

>Translated_114_residues
MLKGLGSLGDMAGMMKKAQEMQAKMAQMQEDMQNVIVEGVSGAGLVKATCTAKGELKGLDIDPSIFNSDDKEVVEDLILA
AIKDAQTKAAEKAQEEMAKLTEGMGLPADMKLPF
>Mature_114_residues
MLKGLGSLGDMAGMMKKAQEMQAKMAQMQEDMQNVIVEGVSGAGLVKATCTAKGELKGLDIDPSIFNSDDKEVVEDLILA
AIKDAQTKAAEKAQEEMAKLTEGMGLPADMKLPF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family [H]

Homologues:

Organism=Escherichia coli, GI1786677, Length=111, Percent_Identity=45.945945945946, Blast_Score=92, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004401 [H]

Pfam domain/function: PF02575 DUF149 [H]

EC number: NA

Molecular weight: Translated: 12120; Mature: 12120

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
9.6 %Met     (Translated Protein)
10.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
9.6 %Met     (Mature Protein)
10.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKGLGSLGDMAGMMKKAQEMQAKMAQMQEDMQNVIVEGVSGAGLVKATCTAKGELKGLD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCC
IDPSIFNSDDKEVVEDLILAAIKDAQTKAAEKAQEEMAKLTEGMGLPADMKLPF
CCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLKGLGSLGDMAGMMKKAQEMQAKMAQMQEDMQNVIVEGVSGAGLVKATCTAKGELKGLD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCC
IDPSIFNSDDKEVVEDLILAAIKDAQTKAAEKAQEEMAKLTEGMGLPADMKLPF
CCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]