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The map label for this gene is ssuC [H]

Identifier: 110678250

GI number: 110678250

Start: 876273

End: 877046

Strand: Direct

Name: ssuC [H]

Synonym: RD1_0903

Alternate gene names: 110678250

Gene position: 876273-877046 (Clockwise)

Preceding gene: 110678249

Following gene: 110678251

Centisome position: 21.2

GC content: 60.21

Gene sequence:

>774_bases
TTGCAGACGTTAAATAGCGCGGTGATGCACAGCGCGCGGCTCACTCCTTTTCTGTCACTGGCCGGGTTACTGGGCATGTG
GGTGGTCGCTGCGATGCTGACACAGGATGCGCAAATCCTGCCAACGCCGTGGCAACTTCTGCCACCTCTGCGTCAGGAAT
TGGCCTCGGGCGAGTTGTGGACGCATCTGAGCGCGACGATCGTGCGGGTCATCTGGGCCTTTGCGCTGGCGATGTCGCTG
GGCACCATTCTGGGTCTGATCATGGGGCGGTCGGCTGCGGTCAACCGCTGGCTTGATCCGTGGCTTGTCGTCTTCCTGAA
TCTGCCCGCGCTTGTTCTGATTGTGCTGTGTTATCTTTGGATCGGCCTGACAGAGGCGGCGGCCATCACTGCCGTCACAT
TGAACAAGGTGCCCAATGTGGCCGTTGTCATCCGCGAAGGTGCGCGCGCGCTCGACCCGGATCTTGACGCGCTCGGCAAA
GTCTATCGGATGTCGTGGTGGACCCGCATGCGCCACATCGTCTTTCCGCAGCTTGCCCCCTTTGTCGCTGCTGCCTCGCG
CTCGGGTCTTGCGGTGATCTGGAAGATCGTTCTGGTGGTCGAGTTTCTGGGCCGCTCGTCGGGGATCGGGTTTCAGATCC
ACCTCTATTTCCAGCTCTTCGATGTTGCGATGGTGCTGGTTTACGCGTTCTCCTTCATCACTGTGATGCTGCTGGTGGAG
TGGATTTTCCTGCAACCGTTCGAGCGTCATGTGGCGCGCTGGCGCAGCGCATGA

Upstream 100 bases:

>100_bases
CCGGTCGACGGGCAGGCTGCCGAAAAGATGCTGGCGCTGATGAAAGAGCTTGGCGGTCCGGAGCTTGTCGGCCCGATGAC
CGCGATGCCACCCGGCCTGT

Downstream 100 bases:

>100_bases
TCAGCGTCAGTATCAGATCCAAGGTCTATGGGGACAAACCCGTTCTGGGTCAGATAGACTTTGATGTTGCCCGTGGTGAA
ACACTGGCGCTGGTCGGGCC

Product: aliphatic sulfonates transport permease protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MQTLNSAVMHSARLTPFLSLAGLLGMWVVAAMLTQDAQILPTPWQLLPPLRQELASGELWTHLSATIVRVIWAFALAMSL
GTILGLIMGRSAAVNRWLDPWLVVFLNLPALVLIVLCYLWIGLTEAAAITAVTLNKVPNVAVVIREGARALDPDLDALGK
VYRMSWWTRMRHIVFPQLAPFVAAASRSGLAVIWKIVLVVEFLGRSSGIGFQIHLYFQLFDVAMVLVYAFSFITVMLLVE
WIFLQPFERHVARWRSA

Sequences:

>Translated_257_residues
MQTLNSAVMHSARLTPFLSLAGLLGMWVVAAMLTQDAQILPTPWQLLPPLRQELASGELWTHLSATIVRVIWAFALAMSL
GTILGLIMGRSAAVNRWLDPWLVVFLNLPALVLIVLCYLWIGLTEAAAITAVTLNKVPNVAVVIREGARALDPDLDALGK
VYRMSWWTRMRHIVFPQLAPFVAAASRSGLAVIWKIVLVVEFLGRSSGIGFQIHLYFQLFDVAMVLVYAFSFITVMLLVE
WIFLQPFERHVARWRSA
>Mature_257_residues
MQTLNSAVMHSARLTPFLSLAGLLGMWVVAAMLTQDAQILPTPWQLLPPLRQELASGELWTHLSATIVRVIWAFALAMSL
GTILGLIMGRSAAVNRWLDPWLVVFLNLPALVLIVLCYLWIGLTEAAAITAVTLNKVPNVAVVIREGARALDPDLDALGK
VYRMSWWTRMRHIVFPQLAPFVAAASRSGLAVIWKIVLVVEFLGRSSGIGFQIHLYFQLFDVAMVLVYAFSFITVMLLVE
WIFLQPFERHVARWRSA

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=246, Percent_Identity=29.6747967479675, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786564, Length=239, Percent_Identity=24.6861924686192, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28734; Mature: 28734

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCHHHHHHHHHCCC
>Mature Secondary Structure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HHHHCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8011666; 9782504; 9384377 [H]