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The map label for this gene is 110678227

Identifier: 110678227

GI number: 110678227

Start: 855881

End: 857038

Strand: Direct

Name: 110678227

Synonym: RD1_0880

Alternate gene names: NA

Gene position: 855881-857038 (Clockwise)

Preceding gene: 110678226

Following gene: 110678228

Centisome position: 20.71

GC content: 59.33

Gene sequence:

>1158_bases
ATGGACCGCGCGCGCGCTGAGCCGTCCTTTGTGCGGGTGGCCTTGTCACGCGCCGTTGATGCAGCAGCGGCGGCGCGGCT
TGCAGCGCAACAGATCAGCGCGCGCGATACCTGTTTCGTGCTGGCCTTTGTGCCGGGCAACCGGAACGGCGCGGTGATTG
CCCATTCCCTTGAAGAGGCTTTGGGCGGCGTGCCGGTTTTCGGCTGCTCAACGGCGGGTCAGATCACAACCGAGGGCTAT
GAAACCGATGCGCTGCTGCTGCTGGCCTTTCCCAAGGCGCATTTTCGCTGCGCCTCGGTTTTGATGGAGCCGCTCAACCC
CCTGTCAACGACGCAGGCAGCGACCCATGCGCAGCGTCATGTTCAAAAGTTTTCCCATACCGCCGGGTGGAACCGGCTGG
GACTTATCTTTACCGATGGTCTGTCCAAGCAGGAAGATATGCTGATTTCGGCGCTGGAAACCGCATTGGGTGATTTGCCG
ATATTTGGCGGCTCCGCCGGGGACGGGCTGCGGTTTGAACAAACCTATGTGCTGCACAACGGCGAGGTGCATCACAACGC
CGCCGTATTGCTATTGCTTGAGACGGATCTGCCCTTTCAGGGTATCGGGTTTGATCACTTCCTGCCCGGCGATAGCCAGG
TGGTGATCACGGATGCCGACCCTGATGATCGCAAGGTATTCGAGATCAATGGCGCACCGGCGGCGCAGGAATACGCCCGC
CTGGTTGGCTGCGCGGTGGAGGATTTGTCGCCCCAGATCTTCGCCGAAAATCCGTTGCTGATCGAGTACAAAGACACGCA
CTACGTGCGCGCGATATCGGATGCGGGCGAAGATGGCGCGCTGTCTTTTCTGGCGGCGATTGATGACGGTCTGATCATGA
CCCTCGGGCAGGGACAGGAGATCATCGAGACCTTGCAAGCCGGATTGGATATCCGTGATGCAGAAGGGCGCAGCCCGGAT
TTCATCCTTGGTTTTGACTGCGTGCTGCGCAAGCTTGAGATCGAGCAAAAACAACTGGGGCATGCGGTGTCGAACGTGCT
GGGGGCGGCGCATGTCTTTGGGTTCAACACTTACGGCGAGCAACATTGCGGCGTGCATATGAACCAGACGCTGGTGGGTG
TGGCCTTTTTTGCACCTGAGCCGAGGGTTTTGTTTTGA

Upstream 100 bases:

>100_bases
ACCGGACCCAAGCGGTGGTTCTGGTCGAAGGGGCGCTGGCGGCACAACGGGGTGACGAACCTGAAGCCCGCGCCTTTCTC
AAGCATTAGGAGGTCGGGCC

Downstream 100 bases:

>100_bases
GTATGATCAACCCTGATGACCCGCTTGAGGTAAGGGTCGAAAAGCAGGCCAAGATCATCGAGGCGCTGATGCGCCGCGCG
GGTCGGCAAAAAGACGTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MDRARAEPSFVRVALSRAVDAAAAARLAAQQISARDTCFVLAFVPGNRNGAVIAHSLEEALGGVPVFGCSTAGQITTEGY
ETDALLLLAFPKAHFRCASVLMEPLNPLSTTQAATHAQRHVQKFSHTAGWNRLGLIFTDGLSKQEDMLISALETALGDLP
IFGGSAGDGLRFEQTYVLHNGEVHHNAAVLLLLETDLPFQGIGFDHFLPGDSQVVITDADPDDRKVFEINGAPAAQEYAR
LVGCAVEDLSPQIFAENPLLIEYKDTHYVRAISDAGEDGALSFLAAIDDGLIMTLGQGQEIIETLQAGLDIRDAEGRSPD
FILGFDCVLRKLEIEQKQLGHAVSNVLGAAHVFGFNTYGEQHCGVHMNQTLVGVAFFAPEPRVLF

Sequences:

>Translated_385_residues
MDRARAEPSFVRVALSRAVDAAAAARLAAQQISARDTCFVLAFVPGNRNGAVIAHSLEEALGGVPVFGCSTAGQITTEGY
ETDALLLLAFPKAHFRCASVLMEPLNPLSTTQAATHAQRHVQKFSHTAGWNRLGLIFTDGLSKQEDMLISALETALGDLP
IFGGSAGDGLRFEQTYVLHNGEVHHNAAVLLLLETDLPFQGIGFDHFLPGDSQVVITDADPDDRKVFEINGAPAAQEYAR
LVGCAVEDLSPQIFAENPLLIEYKDTHYVRAISDAGEDGALSFLAAIDDGLIMTLGQGQEIIETLQAGLDIRDAEGRSPD
FILGFDCVLRKLEIEQKQLGHAVSNVLGAAHVFGFNTYGEQHCGVHMNQTLVGVAFFAPEPRVLF
>Mature_385_residues
MDRARAEPSFVRVALSRAVDAAAAARLAAQQISARDTCFVLAFVPGNRNGAVIAHSLEEALGGVPVFGCSTAGQITTEGY
ETDALLLLAFPKAHFRCASVLMEPLNPLSTTQAATHAQRHVQKFSHTAGWNRLGLIFTDGLSKQEDMLISALETALGDLP
IFGGSAGDGLRFEQTYVLHNGEVHHNAAVLLLLETDLPFQGIGFDHFLPGDSQVVITDADPDDRKVFEINGAPAAQEYAR
LVGCAVEDLSPQIFAENPLLIEYKDTHYVRAISDAGEDGALSFLAAIDDGLIMTLGQGQEIIETLQAGLDIRDAEGRSPD
FILGFDCVLRKLEIEQKQLGHAVSNVLGAAHVFGFNTYGEQHCGVHMNQTLVGVAFFAPEPRVLF

Specific function: Unknown

COG id: COG3287

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41378; Mature: 41378

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRARAEPSFVRVALSRAVDAAAAARLAAQQISARDTCFVLAFVPGNRNGAVIAHSLEEA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEHHHH
LGGVPVFGCSTAGQITTEGYETDALLLLAFPKAHFRCASVLMEPLNPLSTTQAATHAQRH
HCCCEEEECCCCCCEEECCCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
VQKFSHTAGWNRLGLIFTDGLSKQEDMLISALETALGDLPIFGGSAGDGLRFEQTYVLHN
HHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEEEEC
GEVHHNAAVLLLLETDLPFQGIGFDHFLPGDSQVVITDADPDDRKVFEINGAPAAQEYAR
CEEECCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHH
LVGCAVEDLSPQIFAENPLLIEYKDTHYVRAISDAGEDGALSFLAAIDDGLIMTLGQGQE
HHHHHHHHCCCCEEECCCEEEEECCCEEEEEECCCCCCHHHHEEECCCCCEEEEECCCHH
IIETLQAGLDIRDAEGRSPDFILGFDCVLRKLEIEQKQLGHAVSNVLGAAHVFGFNTYGE
HHHHHHHCCCEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC
QHCGVHMNQTLVGVAFFAPEPRVLF
CCCCEECCCEEEEEEEECCCCCCCC
>Mature Secondary Structure
MDRARAEPSFVRVALSRAVDAAAAARLAAQQISARDTCFVLAFVPGNRNGAVIAHSLEEA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEHHHH
LGGVPVFGCSTAGQITTEGYETDALLLLAFPKAHFRCASVLMEPLNPLSTTQAATHAQRH
HCCCEEEECCCCCCEEECCCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
VQKFSHTAGWNRLGLIFTDGLSKQEDMLISALETALGDLPIFGGSAGDGLRFEQTYVLHN
HHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEEEEC
GEVHHNAAVLLLLETDLPFQGIGFDHFLPGDSQVVITDADPDDRKVFEINGAPAAQEYAR
CEEECCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHH
LVGCAVEDLSPQIFAENPLLIEYKDTHYVRAISDAGEDGALSFLAAIDDGLIMTLGQGQE
HHHHHHHHCCCCEEECCCEEEEECCCEEEEEECCCCCCHHHHEEECCCCCEEEEECCCHH
IIETLQAGLDIRDAEGRSPDFILGFDCVLRKLEIEQKQLGHAVSNVLGAAHVFGFNTYGE
HHHHHHHCCCEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC
QHCGVHMNQTLVGVAFFAPEPRVLF
CCCCEECCCEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA