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The map label for this gene is yibD [C]

Identifier: 110678015

GI number: 110678015

Start: 617819

End: 618772

Strand: Direct

Name: yibD [C]

Synonym: RD1_0636

Alternate gene names: 110678015

Gene position: 617819-618772 (Clockwise)

Preceding gene: 110678013

Following gene: 110678027

Centisome position: 14.95

GC content: 57.34

Gene sequence:

>954_bases
ATGAACAGGGATTACTGTGTATACGGGGCCAGCGCAACCAGCGCCGAAAGCGACATGCGGAGCATCCAATTGGACAAGAA
AGCGTCCGTAATTATCCCGACCTATCACAGCTGGCCCGATCTTCAGCGCTGCCTTGATCTTCTGGAGGCGCAAACAACCC
CCGCGTCGGATTTCGAAATCGTTGTCGTCAACAATGCTGCGACCGATGAAGTGCCGGATGACTTTCATCTGCCACCCAAT
GCCCGTGTGATCCGGGAGCCAAAGCCGGGATCATATGCAGCGCGCAACGCGGGGATAGGTGCTGCGGGTACTGACCTTTT
GTTCTTTACCGATGCCGATTGCAGGCCGCGGCCGGACTACATTGCGCAAGGTCTCAAGGCTTTCGCGGCGCATCCGGATG
TCTTGCGGTTTGCCGGCGCTGTCGAGCTTGAGGCCGCAGGAGAGGTATGGACGATTGCGGAGCGTGTGGATCGTATGACG
TCCCTCAAGCAAGAGCATTACGCCAGTCAAGGACGCGCCGCGACGGCGAATATTTTCGTGCGCCGTGCCGCGTTCGAAGC
GGTTGGGCTATTCGATGACACTGCCCTCTCCGGCGGGGATATGGAATGGGCAAGGCGATGCAATGCGCAAGGTGTGAAGC
AGCTTTACGTGCCCGAAGTCATGGTTGGTCACCCTGCGCGCGCCTCGATGGAGGCACATGCAATCAAACGGCGGCGTATT
CTGGGCGCCCAAATCCGAAACGCCGACCCCAGGAAAAAGTGGAAATATCACATTCCACCGTTCAAACGGTTTCTGCTGCC
TTCTTTCGGTGCCATGCGCAGTGCTTTCAGAGAGCCTGACGTGACACTTTGGCAGAGGTTTCAGATATGGTCGTTCCTGA
ACAGACTGCGGCGGGTTATTGCAAAAGAACAGATCCGCCTCACGTGGTTCAAGGGGCGGCATGAACGTCGCTGA

Upstream 100 bases:

>100_bases
CACAGCCATTTTGCCCCAGCTTTCAATCAGCGCGGCGAGCATGGCCGGACGTTGCCGCGTGAGGGTCGAAACCGTGATCC
GAAGGGGGCGCAATGTGGAC

Downstream 100 bases:

>100_bases
AGCATCACGTGAAAAACCTGATTCACATTGCGCTGCGCGACTGACGATGTTTGTGGTGTTTCGCCTTTAGTCATAGCCAA
ACAAAAAACCCCGACGTCGC

Product: glycosyl transferase, putative

Products: NA

Alternate protein names: Glycosyl Transferase Group 2 Family Protein; Family 2 Glycosyl Transferase; Glycosyltransferase; Glycosyl Transferase; Glycosyltransferase AglE; Rhamnosyl Transferase; Glycoside Hydrolase Family 2 Protein; Glycosyl Transferase Family 2 Protein; Sugar Transferase-Like Protein; Dolichyl-Phosphate Mannose Synthase Related Protein; Glycosyltransferase AglI

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MNRDYCVYGASATSAESDMRSIQLDKKASVIIPTYHSWPDLQRCLDLLEAQTTPASDFEIVVVNNAATDEVPDDFHLPPN
ARVIREPKPGSYAARNAGIGAAGTDLLFFTDADCRPRPDYIAQGLKAFAAHPDVLRFAGAVELEAAGEVWTIAERVDRMT
SLKQEHYASQGRAATANIFVRRAAFEAVGLFDDTALSGGDMEWARRCNAQGVKQLYVPEVMVGHPARASMEAHAIKRRRI
LGAQIRNADPRKKWKYHIPPFKRFLLPSFGAMRSAFREPDVTLWQRFQIWSFLNRLRRVIAKEQIRLTWFKGRHERR

Sequences:

>Translated_317_residues
MNRDYCVYGASATSAESDMRSIQLDKKASVIIPTYHSWPDLQRCLDLLEAQTTPASDFEIVVVNNAATDEVPDDFHLPPN
ARVIREPKPGSYAARNAGIGAAGTDLLFFTDADCRPRPDYIAQGLKAFAAHPDVLRFAGAVELEAAGEVWTIAERVDRMT
SLKQEHYASQGRAATANIFVRRAAFEAVGLFDDTALSGGDMEWARRCNAQGVKQLYVPEVMVGHPARASMEAHAIKRRRI
LGAQIRNADPRKKWKYHIPPFKRFLLPSFGAMRSAFREPDVTLWQRFQIWSFLNRLRRVIAKEQIRLTWFKGRHERR
>Mature_317_residues
MNRDYCVYGASATSAESDMRSIQLDKKASVIIPTYHSWPDLQRCLDLLEAQTTPASDFEIVVVNNAATDEVPDDFHLPPN
ARVIREPKPGSYAARNAGIGAAGTDLLFFTDADCRPRPDYIAQGLKAFAAHPDVLRFAGAVELEAAGEVWTIAERVDRMT
SLKQEHYASQGRAATANIFVRRAAFEAVGLFDDTALSGGDMEWARRCNAQGVKQLYVPEVMVGHPARASMEAHAIKRRRI
LGAQIRNADPRKKWKYHIPPFKRFLLPSFGAMRSAFREPDVTLWQRFQIWSFLNRLRRVIAKEQIRLTWFKGRHERR

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 35870; Mature: 35870

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRDYCVYGASATSAESDMRSIQLDKKASVIIPTYHSWPDLQRCLDLLEAQTTPASDFEI
CCCCEEEECCCCCCCHHHHHHHEECCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCEEE
VVVNNAATDEVPDDFHLPPNARVIREPKPGSYAARNAGIGAAGTDLLFFTDADCRPRPDY
EEECCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCCEEEEECCCCCCCHHH
IAQGLKAFAAHPDVLRFAGAVELEAAGEVWTIAERVDRMTSLKQEHYASQGRAATANIFV
HHHHHHHHHCCCHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
RRAAFEAVGLFDDTALSGGDMEWARRCNAQGVKQLYVPEVMVGHPARASMEAHAIKRRRI
HHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHH
LGAQIRNADPRKKWKYHIPPFKRFLLPSFGAMRSAFREPDVTLWQRFQIWSFLNRLRRVI
HHHHHCCCCCCCCCEECCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
AKEQIRLTWFKGRHERR
HHHHEEEEEECCCCCCC
>Mature Secondary Structure
MNRDYCVYGASATSAESDMRSIQLDKKASVIIPTYHSWPDLQRCLDLLEAQTTPASDFEI
CCCCEEEECCCCCCCHHHHHHHEECCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCEEE
VVVNNAATDEVPDDFHLPPNARVIREPKPGSYAARNAGIGAAGTDLLFFTDADCRPRPDY
EEECCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCCEEEEECCCCCCCHHH
IAQGLKAFAAHPDVLRFAGAVELEAAGEVWTIAERVDRMTSLKQEHYASQGRAATANIFV
HHHHHHHHHCCCHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
RRAAFEAVGLFDDTALSGGDMEWARRCNAQGVKQLYVPEVMVGHPARASMEAHAIKRRRI
HHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHH
LGAQIRNADPRKKWKYHIPPFKRFLLPSFGAMRSAFREPDVTLWQRFQIWSFLNRLRRVI
HHHHHCCCCCCCCCEECCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
AKEQIRLTWFKGRHERR
HHHHEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA