| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
Click here to switch to the map view.
The map label for this gene is coaE [H]
Identifier: 110677833
GI number: 110677833
Start: 428871
End: 429464
Strand: Direct
Name: coaE [H]
Synonym: RD1_0439
Alternate gene names: 110677833
Gene position: 428871-429464 (Clockwise)
Preceding gene: 110677832
Following gene: 110677834
Centisome position: 10.38
GC content: 55.72
Gene sequence:
>594_bases GTGACGTTCAAACTCGGTCTCACAGGCTCCATCGGCATGGGTAAATCCACCACGGCACAGCTTTTTGTGGAACTTGGCTG CGCGCTTTGGGATGCGGATGCGGCTGTTCATCGGCTTTATGTCGAGGGCGGTGCAGCGGTTGCGCCCATCGGGGCGATTT ATCCCACCGTGATTCATAAAAACAGCGTCTCACGGGATGCTCTGCGCGACTTGATTCAGAATGATCCCTCGGTCTTGCGC CGGATAGAAAAGATCGTACATCCGCTGGTCGGCGCGGACAGAACCGAGTTTCTGGACCAAACAAAAAGCGACATCACCGT GCTGGATATCCCGCTCCTGTTTGAAACCGGGGCGGACAGCGACATGGACGCCGTGGCCTGTGTCCGCACAACTGCAGAGG AACAGGAGAGACGCGTTCTGGCGCGCGGCAAGATGACAGCAAAGCAATTTCAACAGATCAGGCACAAACAGATGCCGAAT GCGGAAAAATGTGCGCGGGCTGATTTCGTGATCGAAACGGATACGCTTGAACATGCACGTGCGCAGGTTCAGACTATTAC GGAGCAGATACGGAGGGCGATTGCAGATGCGTGA
Upstream 100 bases:
>100_bases ACGGGCTGGGGATGCTGTTACATCAAGGCGTTCCGGGATTTGAGCGCTGGTTTGGTCGGCGACCGGATGTCACAGATGCC ACGCGCGCAGCGGTGCTCGG
Downstream 100 bases:
>100_bases AATTGTGTTGGACACGGAAACGACTGGTTTCGACCCTGAATCAGGCGACCGGATTGTCGAGATTGGCGCGGTGGAATTGA TGGGCCATGTTGCGACGGGC
Product: dephospho-CoA kinase
Products: NA
Alternate protein names: Dephosphocoenzyme A kinase [H]
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MTFKLGLTGSIGMGKSTTAQLFVELGCALWDADAAVHRLYVEGGAAVAPIGAIYPTVIHKNSVSRDALRDLIQNDPSVLR RIEKIVHPLVGADRTEFLDQTKSDITVLDIPLLFETGADSDMDAVACVRTTAEEQERRVLARGKMTAKQFQQIRHKQMPN AEKCARADFVIETDTLEHARAQVQTITEQIRRAIADA
Sequences:
>Translated_197_residues MTFKLGLTGSIGMGKSTTAQLFVELGCALWDADAAVHRLYVEGGAAVAPIGAIYPTVIHKNSVSRDALRDLIQNDPSVLR RIEKIVHPLVGADRTEFLDQTKSDITVLDIPLLFETGADSDMDAVACVRTTAEEQERRVLARGKMTAKQFQQIRHKQMPN AEKCARADFVIETDTLEHARAQVQTITEQIRRAIADA >Mature_196_residues TFKLGLTGSIGMGKSTTAQLFVELGCALWDADAAVHRLYVEGGAAVAPIGAIYPTVIHKNSVSRDALRDLIQNDPSVLRR IEKIVHPLVGADRTEFLDQTKSDITVLDIPLLFETGADSDMDAVACVRTTAEEQERRVLARGKMTAKQFQQIRHKQMPNA EKCARADFVIETDTLEHARAQVQTITEQIRRAIADA
Specific function: Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A [H]
COG id: COG0237
COG function: function code H; Dephospho-CoA kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DPCK (dephospho-CoA kinase) domain [H]
Homologues:
Organism=Homo sapiens, GI191252797, Length=180, Percent_Identity=30, Blast_Score=71, Evalue=5e-13, Organism=Homo sapiens, GI191252795, Length=180, Percent_Identity=30, Blast_Score=71, Evalue=5e-13, Organism=Escherichia coli, GI1786292, Length=176, Percent_Identity=28.4090909090909, Blast_Score=69, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17554944, Length=200, Percent_Identity=28, Blast_Score=73, Evalue=9e-14, Organism=Drosophila melanogaster, GI24644728, Length=198, Percent_Identity=28.2828282828283, Blast_Score=80, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001977 [H]
Pfam domain/function: PF01121 CoaE [H]
EC number: =2.7.1.24 [H]
Molecular weight: Translated: 21685; Mature: 21554
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFKLGLTGSIGMGKSTTAQLFVELGCALWDADAAVHRLYVEGGAAVAPIGAIYPTVIHK CEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC NSVSRDALRDLIQNDPSVLRRIEKIVHPLVGADRTEFLDQTKSDITVLDIPLLFETGADS CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEEEEECCCCC DMDAVACVRTTAEEQERRVLARGKMTAKQFQQIRHKQMPNAEKCARADFVIETDTLEHAR CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHCCEEEECCHHHHHH AQVQTITEQIRRAIADA HHHHHHHHHHHHHHCCC >Mature Secondary Structure TFKLGLTGSIGMGKSTTAQLFVELGCALWDADAAVHRLYVEGGAAVAPIGAIYPTVIHK EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC NSVSRDALRDLIQNDPSVLRRIEKIVHPLVGADRTEFLDQTKSDITVLDIPLLFETGADS CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEEEEECCCCC DMDAVACVRTTAEEQERRVLARGKMTAKQFQQIRHKQMPNAEKCARADFVIETDTLEHAR CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHCCEEEECCHHHHHH AQVQTITEQIRRAIADA HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA