The gene/protein map for NC_007406 is currently unavailable.
Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

Click here to switch to the map view.

The map label for this gene is yhhQ [C]

Identifier: 110677764

GI number: 110677764

Start: 359414

End: 360034

Strand: Direct

Name: yhhQ [C]

Synonym: RD1_0365

Alternate gene names: 110677764

Gene position: 359414-360034 (Clockwise)

Preceding gene: 110677763

Following gene: 110677765

Centisome position: 8.7

GC content: 60.71

Gene sequence:

>621_bases
ATGACACGCGCTCACCTCCCCGGCATCATTGCCATGGCTGCAATCGTTGTTGCCTCCAATATTCTTGTCCAGTTCCTGTT
CGGAAACTGGCTGACGTGGGGGGCCTTCACCTACCCGCTCGCCTTTCTCGTTACGGACATCATGAACCGCGTCTACGGTG
CGCAGGCTGCCCGGCGCGTTGTGTTCACCGGCTTTATCGTCGGGATCATCTGTTCGCTGATCGGCACACAGATCATGGGC
GAATATGGGCCGCTGGTTACGCTTCGGATCGCAATCGGGTCCGGCATCGCCTTCCTGACGGCGCAGTTGCTGGATGTGTC
GATCTTTTCCGCACTTCGGGGAGGAACATGGTGGCGCGCGCCGCTGGCCTCTACGCTGATCGGCAGCACCGTCGATACTG
CCTTATTTTTCAGCATCGCCTTTTCAGCAAGCCTCAGCTTCATCGAGCCTGCCAATGACGTATCCTGGGCGGGGGAGGTT
CTGCCGATCCTTGGATTTGGCCCGCAGGCCCCGCTGTGGGTGTCGCTTGCGATTGCAGATTGGGGCGTCAAGCTGAGCCT
TGCGCTGCTGGCGCTGGTGCCGTTCCGCCTGATCACCGGGCGGATGACCGCCGCGCAGTAA

Upstream 100 bases:

>100_bases
GACGCAAAGGGTTGCCACGCAGCCGCAATAGGCCTAAAGACGCGGCGTCGGCGATGGTTGCCGACCAAGTGCCGCACCCT
TGCCAAAACGGATTATTCAC

Downstream 100 bases:

>100_bases
CACATCTTTAACGAAAAAAAGCTTGGCAAATTTCTGAACCTATGCAACGATTCTGATATCAGAAACAGATAGGTAAAGGA
GGTGATCCAGTGTCAAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MTRAHLPGIIAMAAIVVASNILVQFLFGNWLTWGAFTYPLAFLVTDIMNRVYGAQAARRVVFTGFIVGIICSLIGTQIMG
EYGPLVTLRIAIGSGIAFLTAQLLDVSIFSALRGGTWWRAPLASTLIGSTVDTALFFSIAFSASLSFIEPANDVSWAGEV
LPILGFGPQAPLWVSLAIADWGVKLSLALLALVPFRLITGRMTAAQ

Sequences:

>Translated_206_residues
MTRAHLPGIIAMAAIVVASNILVQFLFGNWLTWGAFTYPLAFLVTDIMNRVYGAQAARRVVFTGFIVGIICSLIGTQIMG
EYGPLVTLRIAIGSGIAFLTAQLLDVSIFSALRGGTWWRAPLASTLIGSTVDTALFFSIAFSASLSFIEPANDVSWAGEV
LPILGFGPQAPLWVSLAIADWGVKLSLALLALVPFRLITGRMTAAQ
>Mature_205_residues
TRAHLPGIIAMAAIVVASNILVQFLFGNWLTWGAFTYPLAFLVTDIMNRVYGAQAARRVVFTGFIVGIICSLIGTQIMGE
YGPLVTLRIAIGSGIAFLTAQLLDVSIFSALRGGTWWRAPLASTLIGSTVDTALFFSIAFSASLSFIEPANDVSWAGEVL
PILGFGPQAPLWVSLAIADWGVKLSLALLALVPFRLITGRMTAAQ

Specific function: Unknown

COG id: COG1738

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yhhQ [H]

Homologues:

Organism=Escherichia coli, GI1789882, Length=194, Percent_Identity=32.9896907216495, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003744 [H]

Pfam domain/function: PF02592 DUF165 [H]

EC number: NA

Molecular weight: Translated: 21977; Mature: 21846

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRAHLPGIIAMAAIVVASNILVQFLFGNWLTWGAFTYPLAFLVTDIMNRVYGAQAARRV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFTGFIVGIICSLIGTQIMGEYGPLVTLRIAIGSGIAFLTAQLLDVSIFSALRGGTWWRA
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHHHHHHCCCCCHH
PLASTLIGSTVDTALFFSIAFSASLSFIEPANDVSWAGEVLPILGFGPQAPLWVSLAIAD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHCCCCCCCCCEEEEEHHH
WGVKLSLALLALVPFRLITGRMTAAQ
CCHHHHHHHHHHHHHHHHHCCHHCCC
>Mature Secondary Structure 
TRAHLPGIIAMAAIVVASNILVQFLFGNWLTWGAFTYPLAFLVTDIMNRVYGAQAARRV
CCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFTGFIVGIICSLIGTQIMGEYGPLVTLRIAIGSGIAFLTAQLLDVSIFSALRGGTWWRA
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHHHHHHCCCCCHH
PLASTLIGSTVDTALFFSIAFSASLSFIEPANDVSWAGEVLPILGFGPQAPLWVSLAIAD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHCCCCCCCCCEEEEEHHH
WGVKLSLALLALVPFRLITGRMTAAQ
CCHHHHHHHHHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]