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The map label for this gene is yaeJ [C]

Identifier: 110677765

GI number: 110677765

Start: 360368

End: 360784

Strand: Direct

Name: yaeJ [C]

Synonym: RD1_0366

Alternate gene names: 110677765

Gene position: 360368-360784 (Clockwise)

Preceding gene: 110677764

Following gene: 110677766

Centisome position: 8.72

GC content: 62.11

Gene sequence:

>417_bases
ATGAGAATAAGCGACAACATCACCATCGAGGATTGGGAACTGACCGAGAGCTTCATGCGCTCCTCCGGTCCCGGCGGGCA
GAACGTCAACAAGGTTTCATCCGCCGTTGAACTGCGGTTTGAGGCCGCGCGTTCACCAAATTTGCCCGCACCGGTCAAAA
CCCGCCTGAAACGGCTGGCCGGGCGGCGCTGGACAACCGATGGCGCGCTGGTTCTGCAATGCGAGGAAACCCGCAGTCAG
GCGCGCAATCGGGAAATTATCCGCGAGCGCCTGGCAGAGCTTATCCGCAAGGCGCTGGTGGCCCCCAAACGGCGGATCGC
AACGCGCCCCACGCTGGGGTCTAAAAAGCGGCGGCTCAAGGCCAAGAAGCAACGCGGCGAGGTCAAATCCCTGCGCGGTC
GGGTGGATCCGGAATAA

Upstream 100 bases:

>100_bases
ATGTGCGGCCCTTTTTGATAGGCGTGGCCGCGCGAACACCTGAGCGGAAACCCATCCGCCCATTCAGTCAGCGTTTGAGG
GCGGTTTGCCCGAGGTCATC

Downstream 100 bases:

>100_bases
TGCCGGCAGTACGCGCAACATCCTTGCGAGAGGTCCAAGGGCGCGCCGCAGGGCAACCGGTCAAGATCTGCCAATGGAAA
CTGGTGCTGATGCGATCACG

Product: peptidyl-tRNA hydrolase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MRISDNITIEDWELTESFMRSSGPGGQNVNKVSSAVELRFEAARSPNLPAPVKTRLKRLAGRRWTTDGALVLQCEETRSQ
ARNREIIRERLAELIRKALVAPKRRIATRPTLGSKKRRLKAKKQRGEVKSLRGRVDPE

Sequences:

>Translated_138_residues
MRISDNITIEDWELTESFMRSSGPGGQNVNKVSSAVELRFEAARSPNLPAPVKTRLKRLAGRRWTTDGALVLQCEETRSQ
ARNREIIRERLAELIRKALVAPKRRIATRPTLGSKKRRLKAKKQRGEVKSLRGRVDPE
>Mature_138_residues
MRISDNITIEDWELTESFMRSSGPGGQNVNKVSSAVELRFEAARSPNLPAPVKTRLKRLAGRRWTTDGALVLQCEETRSQ
ARNREIIRERLAELIRKALVAPKRRIATRPTLGSKKRRLKAKKQRGEVKSLRGRVDPE

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Homo sapiens, GI4557657, Length=90, Percent_Identity=38.8888888888889, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI1786389, Length=133, Percent_Identity=42.1052631578947, Blast_Score=100, Evalue=3e-23,
Organism=Drosophila melanogaster, GI19921098, Length=102, Percent_Identity=36.2745098039216, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15714; Mature: 15714

Theoretical pI: Translated: 11.94; Mature: 11.94

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRISDNITIEDWELTESFMRSSGPGGQNVNKVSSAVELRFEAARSPNLPAPVKTRLKRLA
CCCCCCCEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
GRRWTTDGALVLQCEETRSQARNREIIRERLAELIRKALVAPKRRIATRPTLGSKKRRLK
CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHH
AKKQRGEVKSLRGRVDPE
HHHHHCHHHHHCCCCCCC
>Mature Secondary Structure
MRISDNITIEDWELTESFMRSSGPGGQNVNKVSSAVELRFEAARSPNLPAPVKTRLKRLA
CCCCCCCEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
GRRWTTDGALVLQCEETRSQARNREIIRERLAELIRKALVAPKRRIATRPTLGSKKRRLK
CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHH
AKKQRGEVKSLRGRVDPE
HHHHHCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]