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The map label for this gene is sufS [C]

Identifier: 110677504

GI number: 110677504

Start: 91266

End: 92525

Strand: Direct

Name: sufS [C]

Synonym: RD1_0089

Alternate gene names: 110677504

Gene position: 91266-92525 (Clockwise)

Preceding gene: 110677502

Following gene: 110677505

Centisome position: 2.21

GC content: 62.54

Gene sequence:

>1260_bases
ATGCCTGAATTCGCCCCCGATCTGATGCAAGACATCCGCAGCCGTTTTGCCCATGTGGACGCCTGCCCCTTTCAGGGCCC
GCGCGTCTTTTTCGAAAACGCTGGCGGCGCGCTGACGCTCAATTCGGCGGTTGAGACCTCGGCGAAATTCGCGGCCATTC
CCGACAATCAGGGGCGGGACAATCCGGCAGCGCAGGCGCTGGTCAAGATCATCGACCGCGCCAAATCCGATATGGCACTG
TTTTTCAGCGCACATGGGGGGCAGTTCTTTGTCGGGGAAAGCGGCACCGAACTGACCTTTCGCCTGATCCGCACGGCGGC
GATGGGCAGCGGCGCGGGGTCGATCATCGGGTCCACGGTTGAGCATCCTGCCTCGCGCTCTGCTGCGAGGCATTGGGCGG
AACAGGCGGGCAAACCCTATATCTCGGTCCCGCATGACGATGCGACGGGGGCGGTAACACCAGCGGCATATGCGGCGCTG
ATGACCCCGGATGTCAGGGTCGCGACCATCCTGCACACCTCTCCCGTGACCGGGATTGCAAATGATGTCGCCGGGATCAG
CGCAGCCATCCGCGCAGTGGCCCCGGATGCCTTTATCATCGTGGACGGCATTCAGCACGCCAGCCATGGGCGGATTGATA
TCGCCGGGTACGACATTGATGGCTATGTCATCTCACCCTACAAGGTGTTTTCCCGGCATGGTTATGGCGTGGCATGGGTG
TCAGATCGCATGACCGCCCTGCCGCTTGAACAACTGATCGACGGGCCGCGCGCCTCTTGGGAAATGGGCACGCGGGACAC
CGGGGCCTATGCGACGTTCTCCGATGTGGTGCAGTATTTCGAATGGCTCGGCACGCAGCATACCGACAGCGACGACCGGG
AGCAGCGGATCAGGGCCGCAGGCGGCGCGATCCATGCCCATGAACAGGTTTTAACCCACGCGATGCTGCGCGGCACCGGC
AATCTGCCCGGCCTTGCGGAACTGCCGGGGGTGACGATCCTTGGCGGAGCGGACAATCCAAGGCGCGAGGGGCTTGTCTG
CTTTGCGCTCGACCACGTCCCGGCAGTTGAGATCGTCGAAAAGCTGAACGCGCAGGGCATCCGCACGCATATTCGCAAGG
CGGATCACTATTCGGGCAATATCCTTTCGCCGCTGGGGCTGACGTCAGCGGTGCGCGTGTCGCTGTGCCATTACAACACC
CTCACCGAGGTCTCGGCCTTTCTGGCCGCCATGAAAGATATCGCTGCTCGGGCCAAGTAG

Upstream 100 bases:

>100_bases
GTCGGCGCATGATGCACGTTTCAGCGTGGCAAAGGCGGCTTGACGAAACCCCGTTTGCCGCGCAAGCAGGCACGAAAGAT
ATCGCTGCAAGGACCGCAAG

Downstream 100 bases:

>100_bases
GCTTGCCATTTGAACAGCCACGGCCAAGACTAAGGCCATGCAACCAGACCTCGCCGCAGCCATAGAAAACAGACGAGACG
ACCTGATCGCCCTCACGCAG

Product: aminotransferase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MPEFAPDLMQDIRSRFAHVDACPFQGPRVFFENAGGALTLNSAVETSAKFAAIPDNQGRDNPAAQALVKIIDRAKSDMAL
FFSAHGGQFFVGESGTELTFRLIRTAAMGSGAGSIIGSTVEHPASRSAARHWAEQAGKPYISVPHDDATGAVTPAAYAAL
MTPDVRVATILHTSPVTGIANDVAGISAAIRAVAPDAFIIVDGIQHASHGRIDIAGYDIDGYVISPYKVFSRHGYGVAWV
SDRMTALPLEQLIDGPRASWEMGTRDTGAYATFSDVVQYFEWLGTQHTDSDDREQRIRAAGGAIHAHEQVLTHAMLRGTG
NLPGLAELPGVTILGGADNPRREGLVCFALDHVPAVEIVEKLNAQGIRTHIRKADHYSGNILSPLGLTSAVRVSLCHYNT
LTEVSAFLAAMKDIAARAK

Sequences:

>Translated_419_residues
MPEFAPDLMQDIRSRFAHVDACPFQGPRVFFENAGGALTLNSAVETSAKFAAIPDNQGRDNPAAQALVKIIDRAKSDMAL
FFSAHGGQFFVGESGTELTFRLIRTAAMGSGAGSIIGSTVEHPASRSAARHWAEQAGKPYISVPHDDATGAVTPAAYAAL
MTPDVRVATILHTSPVTGIANDVAGISAAIRAVAPDAFIIVDGIQHASHGRIDIAGYDIDGYVISPYKVFSRHGYGVAWV
SDRMTALPLEQLIDGPRASWEMGTRDTGAYATFSDVVQYFEWLGTQHTDSDDREQRIRAAGGAIHAHEQVLTHAMLRGTG
NLPGLAELPGVTILGGADNPRREGLVCFALDHVPAVEIVEKLNAQGIRTHIRKADHYSGNILSPLGLTSAVRVSLCHYNT
LTEVSAFLAAMKDIAARAK
>Mature_418_residues
PEFAPDLMQDIRSRFAHVDACPFQGPRVFFENAGGALTLNSAVETSAKFAAIPDNQGRDNPAAQALVKIIDRAKSDMALF
FSAHGGQFFVGESGTELTFRLIRTAAMGSGAGSIIGSTVEHPASRSAARHWAEQAGKPYISVPHDDATGAVTPAAYAALM
TPDVRVATILHTSPVTGIANDVAGISAAIRAVAPDAFIIVDGIQHASHGRIDIAGYDIDGYVISPYKVFSRHGYGVAWVS
DRMTALPLEQLIDGPRASWEMGTRDTGAYATFSDVVQYFEWLGTQHTDSDDREQRIRAAGGAIHAHEQVLTHAMLRGTGN
LPGLAELPGVTILGGADNPRREGLVCFALDHVPAVEIVEKLNAQGIRTHIRKADHYSGNILSPLGLTSAVRVSLCHYNTL
TEVSAFLAAMKDIAARAK

Specific function: Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine [H]

COG id: COG0520

COG function: function code E; Selenocysteine lyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. Csd subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787970, Length=412, Percent_Identity=23.0582524271845, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000192
- InterPro:   IPR010970
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00266 Aminotran_5 [H]

EC number: =2.8.1.7 [H]

Molecular weight: Translated: 44660; Mature: 44529

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEFAPDLMQDIRSRFAHVDACPFQGPRVFFENAGGALTLNSAVETSAKFAAIPDNQGRD
CCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEECHHHHCCCCEEECCCCCCCC
NPAAQALVKIIDRAKSDMALFFSAHGGQFFVGESGTELTFRLIRTAAMGSGAGSIIGSTV
CHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHCHHH
EHPASRSAARHWAEQAGKPYISVPHDDATGAVTPAAYAALMTPDVRVATILHTSPVTGIA
CCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCHHH
NDVAGISAAIRAVAPDAFIIVDGIQHASHGRIDIAGYDIDGYVISPYKVFSRHGYGVAWV
HHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEECCCEEECHHHHHHCCCCEEEEC
SDRMTALPLEQLIDGPRASWEMGTRDTGAYATFSDVVQYFEWLGTQHTDSDDREQRIRAA
CCCCHHCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHC
GGAIHAHEQVLTHAMLRGTGNLPGLAELPGVTILGGADNPRREGLVCFALDHVPAVEIVE
CCCHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEECCCCCCCCCCEEEEEECCCCHHHHHH
KLNAQGIRTHIRKADHYSGNILSPLGLTSAVRVSLCHYNTLTEVSAFLAAMKDIAARAK
HHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PEFAPDLMQDIRSRFAHVDACPFQGPRVFFENAGGALTLNSAVETSAKFAAIPDNQGRD
CCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEECHHHHCCCCEEECCCCCCCC
NPAAQALVKIIDRAKSDMALFFSAHGGQFFVGESGTELTFRLIRTAAMGSGAGSIIGSTV
CHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHCHHH
EHPASRSAARHWAEQAGKPYISVPHDDATGAVTPAAYAALMTPDVRVATILHTSPVTGIA
CCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCHHH
NDVAGISAAIRAVAPDAFIIVDGIQHASHGRIDIAGYDIDGYVISPYKVFSRHGYGVAWV
HHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEECCCEEECHHHHHHCCCCEEEEC
SDRMTALPLEQLIDGPRASWEMGTRDTGAYATFSDVVQYFEWLGTQHTDSDDREQRIRAA
CCCCHHCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHC
GGAIHAHEQVLTHAMLRGTGNLPGLAELPGVTILGGADNPRREGLVCFALDHVPAVEIVE
CCCHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEECCCCCCCCCCEEEEEECCCCHHHHHH
KLNAQGIRTHIRKADHYSGNILSPLGLTSAVRVSLCHYNTLTEVSAFLAAMKDIAARAK
HHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA