| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is uppP
Identifier: 110677480
GI number: 110677480
Start: 65746
End: 66549
Strand: Direct
Name: uppP
Synonym: RD1_0064
Alternate gene names: 110677480
Gene position: 65746-66549 (Clockwise)
Preceding gene: 110677469
Following gene: 110677485
Centisome position: 1.59
GC content: 60.7
Gene sequence:
>804_bases ATGACCCTTTTCCACCTCATTCTTGTCGCCGCCATTCAGGGCCTGACGGAGTTTTTGCCTGTCAGCTCTTCAGGCCATCT GGTGCTGCTGCCTGCCCTGACCGGACAGCCGGATCAGGGGCTTGCAATTGACGTCGCCGTCCACGTCGGATCGCTCCTGG CCGTCATCCTGTATTTCTGGAGCGACGTGCGCATCGCTGCCACAGGCTCTCTGAGGCTCGCCCGGGGCAAGGTGGACACC CAAGGCGCATTCCTCGCGCTTTGCCTCATCATCGCGACCATCCCGGTCATGATCGCGGGTCTTATCATAAAGCTGACCGG TCTTGACGAAATGATGCGATCTGTCGCCGTGATCGGGTGGACCATGCTCGGCTTTGGCCTTGTGCTTTACTGGGCTGACA GAACCGGCGCATCAACGCGCACCGCCAGCGGCTGGACGCTCAAAGATGCCTTCCTCATGGGCCTCGCACAGATCCTGTCC CTCATCCCGGGCACGTCACGCTCAGGCATCACGATCACTGCCGCGCGGCGTCTGGGCTACGAACGTGAAGGGGCCGCAAA GCTAGCAATGCTGATGTCCATCCCCACGATCATCGCGTCCGGCGCGGTTCTTGGCGCGGATGTCATTGGCGAAGCGGACT GGCAAATGGCAAGGGATGGCGCCCTCGCAGCAGCGCTTGCATTCGTCTCCGCGCTGCTCGCTCTCGCACTGATGATGCGC CTGCTGAAAAGCGTCAGCTTCACACCATATGTGGTCTACCGGGTAATCCTTGGCCTCATCCTGCTGGTCTATGCCTACAG CTAA
Upstream 100 bases:
>100_bases TTCCATTTTTTGCGTCCGATCCGGACCTAAATTGAGACTTTTCATTTGATTCCCTGTCCTTATACCAGCCTTGCACGCAT GCAGGCAGCGGATTACCCAT
Downstream 100 bases:
>100_bases GATCGCAGGTTTTTAGCAGATTTCTTGATCGCATCATATTGCCCGGACGGGCGGAAACGCCAAAGGTATTCCGGCAACAC GGAAACCATCGTGACAGGTT
Product: undecaprenyl pyrophosphate phosphatase
Products: NA
Alternate protein names: Bacitracin resistance protein; Undecaprenyl pyrophosphate phosphatase
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTLFHLILVAAIQGLTEFLPVSSSGHLVLLPALTGQPDQGLAIDVAVHVGSLLAVILYFWSDVRIAATGSLRLARGKVDT QGAFLALCLIIATIPVMIAGLIIKLTGLDEMMRSVAVIGWTMLGFGLVLYWADRTGASTRTASGWTLKDAFLMGLAQILS LIPGTSRSGITITAARRLGYEREGAAKLAMLMSIPTIIASGAVLGADVIGEADWQMARDGALAAALAFVSALLALALMMR LLKSVSFTPYVVYRVILGLILLVYAYS
Sequences:
>Translated_267_residues MTLFHLILVAAIQGLTEFLPVSSSGHLVLLPALTGQPDQGLAIDVAVHVGSLLAVILYFWSDVRIAATGSLRLARGKVDT QGAFLALCLIIATIPVMIAGLIIKLTGLDEMMRSVAVIGWTMLGFGLVLYWADRTGASTRTASGWTLKDAFLMGLAQILS LIPGTSRSGITITAARRLGYEREGAAKLAMLMSIPTIIASGAVLGADVIGEADWQMARDGALAAALAFVSALLALALMMR LLKSVSFTPYVVYRVILGLILLVYAYS >Mature_266_residues TLFHLILVAAIQGLTEFLPVSSSGHLVLLPALTGQPDQGLAIDVAVHVGSLLAVILYFWSDVRIAATGSLRLARGKVDTQ GAFLALCLIIATIPVMIAGLIIKLTGLDEMMRSVAVIGWTMLGFGLVLYWADRTGASTRTASGWTLKDAFLMGLAQILSL IPGTSRSGITITAARRLGYEREGAAKLAMLMSIPTIIASGAVLGADVIGEADWQMARDGALAAALAFVSALLALALMMRL LKSVSFTPYVVYRVILGLILLVYAYS
Specific function: Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
COG id: COG1968
COG function: function code V; Uncharacterized bacitracin resistance protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uppP family
Homologues:
Organism=Escherichia coli, GI1789437, Length=273, Percent_Identity=30.7692307692308, Blast_Score=112, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UPPP_ROSDO (Q16DZ2)
Other databases:
- EMBL: CP000362 - RefSeq: YP_680487.1 - STRING: Q16DZ2 - GeneID: 4198505 - GenomeReviews: CP000362_GR - KEGG: rde:RD1_0064 - NMPDR: fig|375451.6.peg.60 - eggNOG: COG1968 - HOGENOM: HBG391969 - OMA: SAYICVK - ProtClustDB: PRK00281 - BioCyc: RDEN375451:RD1_0064-MONOMER - GO: GO:0016311 - HAMAP: MF_01006 - InterPro: IPR003824
Pfam domain/function: PF02673 BacA
EC number: =3.6.1.27
Molecular weight: Translated: 28220; Mature: 28089
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x11f2d510)-; HASH(0x1280b22c)-; HASH(0x12b98f28)-; HASH(0x128d7448)-; HASH(0x1282f4c0)-; HASH(0x128cd9b0)-; HASH(0x12f3b03c)-; HASH(0x12808bf8)-;
Cys/Met content:
0.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLFHLILVAAIQGLTEFLPVSSSGHLVLLPALTGQPDQGLAIDVAVHVGSLLAVILYFW CHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHH SDVRIAATGSLRLARGKVDTQGAFLALCLIIATIPVMIAGLIIKLTGLDEMMRSVAVIGW CCCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH TMLGFGLVLYWADRTGASTRTASGWTLKDAFLMGLAQILSLIPGTSRSGITITAARRLGY HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHCCC EREGAAKLAMLMSIPTIIASGAVLGADVIGEADWQMARDGALAAALAFVSALLALALMMR CCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLKSVSFTPYVVYRVILGLILLVYAYS HHHHCCCCHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure TLFHLILVAAIQGLTEFLPVSSSGHLVLLPALTGQPDQGLAIDVAVHVGSLLAVILYFW HHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHH SDVRIAATGSLRLARGKVDTQGAFLALCLIIATIPVMIAGLIIKLTGLDEMMRSVAVIGW CCCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH TMLGFGLVLYWADRTGASTRTASGWTLKDAFLMGLAQILSLIPGTSRSGITITAARRLGY HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHCCC EREGAAKLAMLMSIPTIIASGAVLGADVIGEADWQMARDGALAAALAFVSALLALALMMR CCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLKSVSFTPYVVYRVILGLILLVYAYS HHHHCCCCHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA