Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110677485

Identifier: 110677485

GI number: 110677485

Start: 73014

End: 73127

Strand: Direct

Name: 110677485

Synonym: RD1_0070

Alternate gene names: NA

Gene position: 73014-73127 (Clockwise)

Preceding gene: 110677480

Following gene: 110677490

Centisome position: 1.77

GC content: 54.39

Gene sequence:

>114_bases
GTGACGCCGCAGGTTGCGCTTTCTCCTTATATTGACCCTTACGCGCTTCTCGAACCCGCAACGCCAGCCGGTCTTGTTAC
GCGTTTTTATCAACGCTGTGCGCCGTATTTCTGA

Upstream 100 bases:

>100_bases
GGGTGGGGTGTCGTCGGCACTAGCAGTGGGCCAGCCTTCGCTCAATTGGGTAAACGAATGATTACCCTATCCTTTCGAAT
AGTCGCTGCGACGAAAAAGA

Downstream 100 bases:

>100_bases
CGGGCTGTTACGCATTGATGCAAACAGCCGGAAACAACTTTCACAAAATACCCGCATCACCAAGCAGAATTGGAATTCTT
CAAAAACCCGATAAAGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 37; Mature: 36

Protein sequence:

>37_residues
MTPQVALSPYIDPYALLEPATPAGLVTRFYQRCAPYF

Sequences:

>Translated_37_residues
MTPQVALSPYIDPYALLEPATPAGLVTRFYQRCAPYF
>Mature_36_residues
TPQVALSPYIDPYALLEPATPAGLVTRFYQRCAPYF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4162; Mature: 4031

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPQVALSPYIDPYALLEPATPAGLVTRFYQRCAPYF
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TPQVALSPYIDPYALLEPATPAGLVTRFYQRCAPYF
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA