Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

Click here to switch to the map view.

The map label for this gene is 110677469

Identifier: 110677469

GI number: 110677469

Start: 50763

End: 51347

Strand: Direct

Name: 110677469

Synonym: RD1_0053

Alternate gene names: NA

Gene position: 50763-51347 (Clockwise)

Preceding gene: 110677468

Following gene: 110677480

Centisome position: 1.23

GC content: 61.2

Gene sequence:

>585_bases
ATGTATACGGTCATCGGCCCCGTCAAATCCCGCGCCATGCGCGTCCTGTGGATGCTCGAAGAACTGGGCGAGGCTTATAA
TCACATCGACGCCGCACCCCGCTCCGACGCGGCGCGCACATATAACCCATCCGGCAAGGTGCCCGCGCTGCTGGACGGCA
CGGAGGTGCTGACCGATTCGATGGCCATCCTTACCTATCTGGCGGATAAACACGGCAAACTCACCGCACCGGCAGGCACA
ATTGCGCGGGCGCGGCAGGATGCGATGACCTTCTGGCTGTTGGATGAATTCGACGCGATCCTCTGGGCCGCAGCAAAGCA
CAGCTTCGTGTTGCCGCAGGAACAGCGCATGCCAGCGGTCAAGGACTCCCTCAAGGCAGAGTTCAGCGCATCCGCTGATC
AGCTGGCCGCAAAACTTGATGGGCCGTTTCTGATGGGTGATCAGCTGACGGTTCCGGACATTCTGGCCTGTCACTGCCTG
AACTGGGCTGTCGGTGCCGGATTCCCGCGCGTGGATGACAGACTATTCGCCTATGGCAAAAACCTGCGCCAACGGCCTGC
GTTTCAGGCGGCGGCTGCGAGGTAA

Upstream 100 bases:

>100_bases
GCGCTCTGCCGGGCAACATGCGCCGGGCATGGCGCTGGTCGAACGCGCCTTTATCCGCCTTGCCATGCTGGCGCCTCGAT
AACCGCGAAAGGAAACGCAC

Downstream 100 bases:

>100_bases
TCCACCGCCCCGCGTCCCGCCCAGCGCCCGGTCGCAAGACATGCGGTTATCAGGTAGCCGCCCGTCGGTGCTTCCCAGTC
GATCATTTCCCCCGCACAGA

Product: glutathione S-transferase family protein

Products: NA

Alternate protein names: Glutathione S-Transferase Family Protein; Glutathione S-Transferase; Glutathione S-Transferase-Like; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase N-Terminal Domain; Glutathione S-Transferase Like Protein; Glutathione S-Transferase N-Terminal Domain Protein

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MYTVIGPVKSRAMRVLWMLEELGEAYNHIDAAPRSDAARTYNPSGKVPALLDGTEVLTDSMAILTYLADKHGKLTAPAGT
IARARQDAMTFWLLDEFDAILWAAAKHSFVLPQEQRMPAVKDSLKAEFSASADQLAAKLDGPFLMGDQLTVPDILACHCL
NWAVGAGFPRVDDRLFAYGKNLRQRPAFQAAAAR

Sequences:

>Translated_194_residues
MYTVIGPVKSRAMRVLWMLEELGEAYNHIDAAPRSDAARTYNPSGKVPALLDGTEVLTDSMAILTYLADKHGKLTAPAGT
IARARQDAMTFWLLDEFDAILWAAAKHSFVLPQEQRMPAVKDSLKAEFSASADQLAAKLDGPFLMGDQLTVPDILACHCL
NWAVGAGFPRVDDRLFAYGKNLRQRPAFQAAAAR
>Mature_194_residues
MYTVIGPVKSRAMRVLWMLEELGEAYNHIDAAPRSDAARTYNPSGKVPALLDGTEVLTDSMAILTYLADKHGKLTAPAGT
IARARQDAMTFWLLDEFDAILWAAAKHSFVLPQEQRMPAVKDSLKAEFSASADQLAAKLDGPFLMGDQLTVPDILACHCL
NWAVGAGFPRVDDRLFAYGKNLRQRPAFQAAAAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21249; Mature: 21249

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTVIGPVKSRAMRVLWMLEELGEAYNHIDAAPRSDAARTYNPSGKVPALLDGTEVLTDS
CCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCHHHHHHH
MAILTYLADKHGKLTAPAGTIARARQDAMTFWLLDEFDAILWAAAKHSFVLPQEQRMPAV
HHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHH
KDSLKAEFSASADQLAAKLDGPFLMGDQLTVPDILACHCLNWAVGAGFPRVDDRLFAYGK
HHHHHHHHCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
NLRQRPAFQAAAAR
HHHHCCCHHHHCCC
>Mature Secondary Structure
MYTVIGPVKSRAMRVLWMLEELGEAYNHIDAAPRSDAARTYNPSGKVPALLDGTEVLTDS
CCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCHHHHHHH
MAILTYLADKHGKLTAPAGTIARARQDAMTFWLLDEFDAILWAAAKHSFVLPQEQRMPAV
HHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHH
KDSLKAEFSASADQLAAKLDGPFLMGDQLTVPDILACHCLNWAVGAGFPRVDDRLFAYGK
HHHHHHHHCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
NLRQRPAFQAAAAR
HHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA