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The map label for this gene is 110677468

Identifier: 110677468

GI number: 110677468

Start: 49743

End: 50744

Strand: Direct

Name: 110677468

Synonym: RD1_0052

Alternate gene names: NA

Gene position: 49743-50744 (Clockwise)

Preceding gene: 110677467

Following gene: 110677469

Centisome position: 1.2

GC content: 64.27

Gene sequence:

>1002_bases
ATGAAACTCTCCACCCGCGATGCTGTTTCCTACTTCGCGCGCCCTGACCCGGACAAGACCGGCATTCTGATTTACGGCGC
GGACGCCATGCGCGTGGCCCTGAAACGCCAGCAATTGCTGGCCGCGCTTTTGGGCAAGGAGGCCGAGGAAGAAATGCGCC
TGACGCGTCTGAACGGCGGTGATCTGCGCAAGGACCCGGCGCTTTTGCTGGATGCTGTCAAGGCCGTGGGGTTCTTCCCC
GGCCCGCGCGCCGCCTTCGTGCAAGAGGCCAACGAAAACACGGCCCCCGCAATCCTGACCGCCCTCGCCGATTGGCAGCC
CGGGGATGCGCAGATCATTGTGACCGCCGGGGCGCTGAAACCAACCTCGAAACTGCGCAAGGCCTTTGAGGCCCATCCGA
ACGCCTATGCCGCCGGAATTTACGACAACCCGCCCACACGCGCGGAAATCGAAACGACGCTGGCTGAAACCGGCCTCGCC
CTGCCGACAGGTGACGTGATGGCCGCCCTCAGCGATCTGGCGCAGGCCATTGACCCGGGTGATTTTCGCCAGACCATCGA
AAAACTCGCGCTCTACAAATTGCACGACCCGGCCCCGATCTCCCTGCAGGACATCGCGGCCTGCGCGCCAACCTCGACCG
AGGCGGATGTGGATGATGTCCTGATGGTGGTTGCCGAGGCGCGCGCCCATGAAATCGGCCCGATGATGCAGAAACTGATC
GCGCAGGGGGCCAATCCGGTCGGCCTGTGTATCGGGGCGATGCGCCATTTCCGCGCCCTGCACCGGGCGGCCTGTGATAC
ATCCGGCAGGCCGACGATATTTGGCCCCAACCGGGATCGCATGCTGGCACAGTCGCGCAAATGGGGCGCGGCCAAACTGG
AAACCGCGCTCACCGTCCTGATGGATACAGACCTGCAACTGCGCTCTGCCGGGCAACATGCGCCGGGCATGGCGCTGGTC
GAACGCGCCTTTATCCGCCTTGCCATGCTGGCGCCTCGATAA

Upstream 100 bases:

>100_bases
CGACCGTCGCGACGCTGGCCGCCGAACGGGATGCCCGCGAGCGGCTGATGTCCCTGCTCGCAGACCAGATTGTCGTCCGC
TTGCTGAGCACCGATCTGAC

Downstream 100 bases:

>100_bases
CCGCGAAAGGAAACGCACATGTATACGGTCATCGGCCCCGTCAAATCCCGCGCCATGCGCGTCCTGTGGATGCTCGAAGA
ACTGGGCGAGGCTTATAATC

Product: hypothetical protein

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Delta Subunit; DNA Polymerase III Delta; DNA Polymerase II

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MKLSTRDAVSYFARPDPDKTGILIYGADAMRVALKRQQLLAALLGKEAEEEMRLTRLNGGDLRKDPALLLDAVKAVGFFP
GPRAAFVQEANENTAPAILTALADWQPGDAQIIVTAGALKPTSKLRKAFEAHPNAYAAGIYDNPPTRAEIETTLAETGLA
LPTGDVMAALSDLAQAIDPGDFRQTIEKLALYKLHDPAPISLQDIAACAPTSTEADVDDVLMVVAEARAHEIGPMMQKLI
AQGANPVGLCIGAMRHFRALHRAACDTSGRPTIFGPNRDRMLAQSRKWGAAKLETALTVLMDTDLQLRSAGQHAPGMALV
ERAFIRLAMLAPR

Sequences:

>Translated_333_residues
MKLSTRDAVSYFARPDPDKTGILIYGADAMRVALKRQQLLAALLGKEAEEEMRLTRLNGGDLRKDPALLLDAVKAVGFFP
GPRAAFVQEANENTAPAILTALADWQPGDAQIIVTAGALKPTSKLRKAFEAHPNAYAAGIYDNPPTRAEIETTLAETGLA
LPTGDVMAALSDLAQAIDPGDFRQTIEKLALYKLHDPAPISLQDIAACAPTSTEADVDDVLMVVAEARAHEIGPMMQKLI
AQGANPVGLCIGAMRHFRALHRAACDTSGRPTIFGPNRDRMLAQSRKWGAAKLETALTVLMDTDLQLRSAGQHAPGMALV
ERAFIRLAMLAPR
>Mature_333_residues
MKLSTRDAVSYFARPDPDKTGILIYGADAMRVALKRQQLLAALLGKEAEEEMRLTRLNGGDLRKDPALLLDAVKAVGFFP
GPRAAFVQEANENTAPAILTALADWQPGDAQIIVTAGALKPTSKLRKAFEAHPNAYAAGIYDNPPTRAEIETTLAETGLA
LPTGDVMAALSDLAQAIDPGDFRQTIEKLALYKLHDPAPISLQDIAACAPTSTEADVDDVLMVVAEARAHEIGPMMQKLI
AQGANPVGLCIGAMRHFRALHRAACDTSGRPTIFGPNRDRMLAQSRKWGAAKLETALTVLMDTDLQLRSAGQHAPGMALV
ERAFIRLAMLAPR

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 35734; Mature: 35734

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSTRDAVSYFARPDPDKTGILIYGADAMRVALKRQQLLAALLGKEAEEEMRLTRLNGG
CCCCHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
DLRKDPALLLDAVKAVGFFPGPRAAFVQEANENTAPAILTALADWQPGDAQIIVTAGALK
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEECCCC
PTSKLRKAFEAHPNAYAAGIYDNPPTRAEIETTLAETGLALPTGDVMAALSDLAQAIDPG
CHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC
DFRQTIEKLALYKLHDPAPISLQDIAACAPTSTEADVDDVLMVVAEARAHEIGPMMQKLI
HHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AQGANPVGLCIGAMRHFRALHRAACDTSGRPTIFGPNRDRMLAQSRKWGAAKLETALTVL
HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHH
MDTDLQLRSAGQHAPGMALVERAFIRLAMLAPR
HCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLSTRDAVSYFARPDPDKTGILIYGADAMRVALKRQQLLAALLGKEAEEEMRLTRLNGG
CCCCHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
DLRKDPALLLDAVKAVGFFPGPRAAFVQEANENTAPAILTALADWQPGDAQIIVTAGALK
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEECCCC
PTSKLRKAFEAHPNAYAAGIYDNPPTRAEIETTLAETGLALPTGDVMAALSDLAQAIDPG
CHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC
DFRQTIEKLALYKLHDPAPISLQDIAACAPTSTEADVDDVLMVVAEARAHEIGPMMQKLI
HHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AQGANPVGLCIGAMRHFRALHRAACDTSGRPTIFGPNRDRMLAQSRKWGAAKLETALTVL
HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHH
MDTDLQLRSAGQHAPGMALVERAFIRLAMLAPR
HCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA