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The map label for this gene is 110677467

Identifier: 110677467

GI number: 110677467

Start: 49267

End: 49746

Strand: Direct

Name: 110677467

Synonym: RD1_0050

Alternate gene names: NA

Gene position: 49267-49746 (Clockwise)

Preceding gene: 110677466

Following gene: 110677468

Centisome position: 1.19

GC content: 63.75

Gene sequence:

>480_bases
ATGTCGTCGTATAGCCGCCGCAGCCTGCTTTTCCTGCCCCTCGCTCTGGGGGCCTGCGGCTTTGCGCCGGTCTATGGAAC
CGGCAGCACCGGCAGCGCGCTGCAAAACGCGGTTGAGGTCAGTGACCCCAATGACGTGGACGGATACCTTGTCGTGCGCC
GCCTCGAAGAGCGTCTGGGCCGCGCCGCACAACCCACTTACAAACTGACGCTGGCAGTTGACTCCAAACGCGAAGCGCTG
GCGGTGAACCGAAACAGCAACATCAACCGCTACAACATCGTCGGCACGGCGAACTACGTTCTGGTCGAACAGGCGACGGG
TCGGGTTGTCACGTCGGGCTCCGTCGATAACTTCACCGGCTCCTCGGCGACAGGCACGACCGTCGCGACGCTGGCCGCCG
AACGGGATGCCCGCGAGCGGCTGATGTCCCTGCTCGCAGACCAGATTGTCGTCCGCTTGCTGAGCACCGATCTGACATGA

Upstream 100 bases:

>100_bases
GAAGAAGTTGAAAAAATCGCCCTTGCGGACCCGGCTGTGATACGCTCCCTGAATGGGGCCACCCCGAAAAAGATCATCGT
CGTACCGGGACGGATTGTGA

Downstream 100 bases:

>100_bases
AACTCTCCACCCGCGATGCTGTTTCCTACTTCGCGCGCCCTGACCCGGACAAGACCGGCATTCTGATTTACGGCGCGGAC
GCCATGCGCGTGGCCCTGAA

Product: putative lipoprotein

Products: NA

Alternate protein names: Lipoprotein

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MSSYSRRSLLFLPLALGACGFAPVYGTGSTGSALQNAVEVSDPNDVDGYLVVRRLEERLGRAAQPTYKLTLAVDSKREAL
AVNRNSNINRYNIVGTANYVLVEQATGRVVTSGSVDNFTGSSATGTTVATLAAERDARERLMSLLADQIVVRLLSTDLT

Sequences:

>Translated_159_residues
MSSYSRRSLLFLPLALGACGFAPVYGTGSTGSALQNAVEVSDPNDVDGYLVVRRLEERLGRAAQPTYKLTLAVDSKREAL
AVNRNSNINRYNIVGTANYVLVEQATGRVVTSGSVDNFTGSSATGTTVATLAAERDARERLMSLLADQIVVRLLSTDLT
>Mature_158_residues
SSYSRRSLLFLPLALGACGFAPVYGTGSTGSALQNAVEVSDPNDVDGYLVVRRLEERLGRAAQPTYKLTLAVDSKREALA
VNRNSNINRYNIVGTANYVLVEQATGRVVTSGSVDNFTGSSATGTTVATLAAERDARERLMSLLADQIVVRLLSTDLT

Specific function: Unknown

COG id: COG5468

COG function: function code S; Predicted secreted (periplasmic) protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16973; Mature: 16842

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSYSRRSLLFLPLALGACGFAPVYGTGSTGSALQNAVEVSDPNDVDGYLVVRRLEERLG
CCCCCCCCEEEHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
RAAQPTYKLTLAVDSKREALAVNRNSNINRYNIVGTANYVLVEQATGRVVTSGSVDNFTG
CCCCCCEEEEEEECCCCCEEEECCCCCCCEEEEEECCCEEEEECCCCEEEECCCCCCCCC
SSATGTTVATLAAERDARERLMSLLADQIVVRLLSTDLT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSYSRRSLLFLPLALGACGFAPVYGTGSTGSALQNAVEVSDPNDVDGYLVVRRLEERLG
CCCCCCCEEEHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
RAAQPTYKLTLAVDSKREALAVNRNSNINRYNIVGTANYVLVEQATGRVVTSGSVDNFTG
CCCCCCEEEEEEECCCCCEEEECCCCCCCEEEEEECCCEEEEECCCCEEEECCCCCCCCC
SSATGTTVATLAAERDARERLMSLLADQIVVRLLSTDLT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA