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The map label for this gene is 110677450

Identifier: 110677450

GI number: 110677450

Start: 30714

End: 31298

Strand: Direct

Name: 110677450

Synonym: RD1_0031

Alternate gene names: NA

Gene position: 30714-31298 (Clockwise)

Preceding gene: 110677449

Following gene: 110677455

Centisome position: 0.74

GC content: 57.95

Gene sequence:

>585_bases
ATGAGCAGAACTCTTCGCGCTATGGCAATTTTACTGTTGGTCGCCTCCTGCGGGGGGGTGTCCTCTACGGCTCCGCGTAA
TCTGAACGATGCGTGCAGCATTGCCGAACAGCGCCCTGAATACATGCGTGCGTTTCAGCGGACCCAGCAAAAATGGGGCG
TACCGGTGCATGTGCAAATGGCAACGATGCATCAGGAAAGCCGGTTTATCGGCAATGCAAAGACGCCGCATAAATACGCT
CTGGGCGTCATTCCGATGGGCCGCGTTTCCAGCGCATATGGCTATTCGCAAGCGCTGGATGGCACATGGTCGGATTACCA
GCGCGCCACGGGCAAGCGTCTGGCGCGCCGGGATCGTATCCGCGACGCCTCCGATTTCATGGGCTGGTACATGAACATCA
GCCAGCAGCGTAACGGCATCCCCTTGCATGATGCGCGCAACCAGTACCTTGCCTATCACGAAGGGCACACAGGCTATGCG
CGTGGATCCTACAACCGCAAATCCTGGCTTTTGAATGTGGCCGACAAGGTGGATGCGCGCGCCGATCTTTATCAGGCGCA
ACTGGCCACCTGTAACCTGCGCTGA

Upstream 100 bases:

>100_bases
TTGCCTCTGTTGCTGGGCTTTTTGTTGTAGAAAACGTGATTTCCCCTTGGCGAAGATTTGCGCTACTGCAATAAAAAACA
AAAATAAAAGCGAGAGGCAG

Downstream 100 bases:

>100_bases
TCACATCAGCGGTCGCGGCCTTTCTCGCGATCCGCATCGAAAAGAGAGTTGGGCAGCTCCATGCCCGTCTCGAATGCGTC
CAATATGACCCGCGTCTGTG

Product: putative lipoprotein

Products: NA

Alternate protein names: Transcriptional Regulatory Protein; Lytic Transglycosylase Catalytic; Soluble Lytic Murein Transglycosylase; Glycoside Hydroylase Family; Lytic Murein Transglycosylase; Glycoside Hydrolase Family Protein; Transmembrane Protein; Transglycosylase SLT Domain; Conserved Secreted Protein; Lytic Transglycosylase; Transcriptional Regulator Protein

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MSRTLRAMAILLLVASCGGVSSTAPRNLNDACSIAEQRPEYMRAFQRTQQKWGVPVHVQMATMHQESRFIGNAKTPHKYA
LGVIPMGRVSSAYGYSQALDGTWSDYQRATGKRLARRDRIRDASDFMGWYMNISQQRNGIPLHDARNQYLAYHEGHTGYA
RGSYNRKSWLLNVADKVDARADLYQAQLATCNLR

Sequences:

>Translated_194_residues
MSRTLRAMAILLLVASCGGVSSTAPRNLNDACSIAEQRPEYMRAFQRTQQKWGVPVHVQMATMHQESRFIGNAKTPHKYA
LGVIPMGRVSSAYGYSQALDGTWSDYQRATGKRLARRDRIRDASDFMGWYMNISQQRNGIPLHDARNQYLAYHEGHTGYA
RGSYNRKSWLLNVADKVDARADLYQAQLATCNLR
>Mature_193_residues
SRTLRAMAILLLVASCGGVSSTAPRNLNDACSIAEQRPEYMRAFQRTQQKWGVPVHVQMATMHQESRFIGNAKTPHKYAL
GVIPMGRVSSAYGYSQALDGTWSDYQRATGKRLARRDRIRDASDFMGWYMNISQQRNGIPLHDARNQYLAYHEGHTGYAR
GSYNRKSWLLNVADKVDARADLYQAQLATCNLR

Specific function: Unknown

COG id: COG4764

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21961; Mature: 21830

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTLRAMAILLLVASCGGVSSTAPRNLNDACSIAEQRPEYMRAFQRTQQKWGVPVHVQM
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEH
ATMHQESRFIGNAKTPHKYALGVIPMGRVSSAYGYSQALDGTWSDYQRATGKRLARRDRI
HHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHC
RDASDFMGWYMNISQQRNGIPLHDARNQYLAYHEGHTGYARGSYNRKSWLLNVADKVDAR
CCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHEEEHHHHHHHH
ADLYQAQLATCNLR
HHHHHHHHHHCCCC
>Mature Secondary Structure 
SRTLRAMAILLLVASCGGVSSTAPRNLNDACSIAEQRPEYMRAFQRTQQKWGVPVHVQM
CHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEH
ATMHQESRFIGNAKTPHKYALGVIPMGRVSSAYGYSQALDGTWSDYQRATGKRLARRDRI
HHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHC
RDASDFMGWYMNISQQRNGIPLHDARNQYLAYHEGHTGYARGSYNRKSWLLNVADKVDAR
CCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHEEEHHHHHHHH
ADLYQAQLATCNLR
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA