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The map label for this gene is 110677449

Identifier: 110677449

GI number: 110677449

Start: 29762

End: 30643

Strand: Direct

Name: 110677449

Synonym: RD1_0030

Alternate gene names: NA

Gene position: 29762-30643 (Clockwise)

Preceding gene: 110677447

Following gene: 110677450

Centisome position: 0.72

GC content: 58.39

Gene sequence:

>882_bases
GTGAACCTCGCACTGACAGTGCTCGAAATCGTAGCGCCGGTGTTTCTGTTGGCAGCCATCGGATTTGTCTGGGTCAAACT
GGGCAATGAATACCGCATCAGGTTCGTCACACAGCTTGCCATGACGCTCTCGGTGCCCTGCCTGATTTTCGTCTCCCTGA
TGGAAACACAGATCGCACCAGAAGACTTGACCGCCCTGTCACTGGCCGCCATCGGGGCCTATGGCGTCGTCACAGTCGCA
ATCCTTGCGCTGGTTTTTGTGCTCAGGCTCAACCGCCAGACATTTGCCGCGCCCCTCATGTTCGGCAATACCGGTAACAT
CGGGTTGCCACTGGCGTTTTTCGCCTATGGCGAAACGGGGCTGGGCTATGCCATCATCGTGTTCGGCATCATGGCCGTCT
GGTCTTTCACCTTTGGCGTCTGGCTCGTCGCGGGTGCCGGATCGTTCGGCAAGGTGGTCCGTGAACCCATGGTCGCAGGC
ACCATTCTGGGCGCGATCTTTTTGTGGCAGGGCTGGCAAACCCCGCCCTTTGTGACAAATACGCTCGACCTCATCGGGCA
GATGGCAATTCCGCTGATGCTCATCACCCTTGGGGTCGCCATTGCGCGGCTGAAACCGGGGGGGATCTTGCGCGCAACGG
CTTTAAGCGCAGTTAAACTGGTGATCTGCACGGGCGTCGCGTGGTACATCGGGGATGCGTTTGAACTTGATCGCATTGCC
TTGGGCGTGCTGGTCCTGCAGGTAGCAACACCGGTGGCGGTCACCTCTTACATGCTGGCGGAAAAATACGGCGCGGATGC
CGAAGAGGTTGCGGGCCTCGTTGTGGCTTCAACCCTGATGTCTGTTGCTGCCTTGCCTCTGTTGCTGGGCTTTTTGTTGT
AG

Upstream 100 bases:

>100_bases
GCGCGTTTTAATCATAGCATTGCAGCCCCTCGGTTCCGTTAGTAGACGCATCGGGCGGTGTTTGTCCAATACTTGGTCGG
CAAAAGTAAGGAAACAGTTT

Downstream 100 bases:

>100_bases
AAAACGTGATTTCCCCTTGGCGAAGATTTGCGCTACTGCAATAAAAAACAAAAATAAAAGCGAGAGGCAGATGAGCAGAA
CTCTTCGCGCTATGGCAATT

Product: auxin efflux carrier family protein

Products: NA

Alternate protein names: Auxin Efflux Carrier Family Protein; Permease; Transporter AEC Family; Malonate Transporter; Malonate Efflux Carrier; Transporter Auxin Efflux Carrier Family; Auxin Efflux Carrier Protein; Malate Permease; Malonate Efflux Carrier Protein; Transporter Auxin Efflux Carrier Family Protein; L-Malate Uniport Protein; Auxin Efflux Carrier Superfamily; Auxin Efflux Carrier Family Transporter; AEC Family Permease; Membrane Transport Family

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MNLALTVLEIVAPVFLLAAIGFVWVKLGNEYRIRFVTQLAMTLSVPCLIFVSLMETQIAPEDLTALSLAAIGAYGVVTVA
ILALVFVLRLNRQTFAAPLMFGNTGNIGLPLAFFAYGETGLGYAIIVFGIMAVWSFTFGVWLVAGAGSFGKVVREPMVAG
TILGAIFLWQGWQTPPFVTNTLDLIGQMAIPLMLITLGVAIARLKPGGILRATALSAVKLVICTGVAWYIGDAFELDRIA
LGVLVLQVATPVAVTSYMLAEKYGADAEEVAGLVVASTLMSVAALPLLLGFLL

Sequences:

>Translated_293_residues
MNLALTVLEIVAPVFLLAAIGFVWVKLGNEYRIRFVTQLAMTLSVPCLIFVSLMETQIAPEDLTALSLAAIGAYGVVTVA
ILALVFVLRLNRQTFAAPLMFGNTGNIGLPLAFFAYGETGLGYAIIVFGIMAVWSFTFGVWLVAGAGSFGKVVREPMVAG
TILGAIFLWQGWQTPPFVTNTLDLIGQMAIPLMLITLGVAIARLKPGGILRATALSAVKLVICTGVAWYIGDAFELDRIA
LGVLVLQVATPVAVTSYMLAEKYGADAEEVAGLVVASTLMSVAALPLLLGFLL
>Mature_293_residues
MNLALTVLEIVAPVFLLAAIGFVWVKLGNEYRIRFVTQLAMTLSVPCLIFVSLMETQIAPEDLTALSLAAIGAYGVVTVA
ILALVFVLRLNRQTFAAPLMFGNTGNIGLPLAFFAYGETGLGYAIIVFGIMAVWSFTFGVWLVAGAGSFGKVVREPMVAG
TILGAIFLWQGWQTPPFVTNTLDLIGQMAIPLMLITLGVAIARLKPGGILRATALSAVKLVICTGVAWYIGDAFELDRIA
LGVLVLQVATPVAVTSYMLAEKYGADAEEVAGLVVASTLMSVAALPLLLGFLL

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31001; Mature: 31001

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLALTVLEIVAPVFLLAAIGFVWVKLGNEYRIRFVTQLAMTLSVPCLIFVSLMETQIAP
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EDLTALSLAAIGAYGVVTVAILALVFVLRLNRQTFAAPLMFGNTGNIGLPLAFFAYGETG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEECCCCCCCCHHHHEEECCCC
LGYAIIVFGIMAVWSFTFGVWLVAGAGSFGKVVREPMVAGTILGAIFLWQGWQTPPFVTN
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
TLDLIGQMAIPLMLITLGVAIARLKPGGILRATALSAVKLVICTGVAWYIGDAFELDRIA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LGVLVLQVATPVAVTSYMLAEKYGADAEEVAGLVVASTLMSVAALPLLLGFLL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNLALTVLEIVAPVFLLAAIGFVWVKLGNEYRIRFVTQLAMTLSVPCLIFVSLMETQIAP
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EDLTALSLAAIGAYGVVTVAILALVFVLRLNRQTFAAPLMFGNTGNIGLPLAFFAYGETG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEECCCCCCCCHHHHEEECCCC
LGYAIIVFGIMAVWSFTFGVWLVAGAGSFGKVVREPMVAGTILGAIFLWQGWQTPPFVTN
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
TLDLIGQMAIPLMLITLGVAIARLKPGGILRATALSAVKLVICTGVAWYIGDAFELDRIA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LGVLVLQVATPVAVTSYMLAEKYGADAEEVAGLVVASTLMSVAALPLLLGFLL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA