| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is ggtA [H]
Identifier: 110677447
GI number: 110677447
Start: 27764
End: 29341
Strand: Direct
Name: ggtA [H]
Synonym: RD1_0028
Alternate gene names: 110677447
Gene position: 27764-29341 (Clockwise)
Preceding gene: 110677446
Following gene: 110677449
Centisome position: 0.67
GC content: 59.57
Gene sequence:
>1578_bases ATGCGCGATTTTCACCTTCCCGGCCGTTCCCCGGTTCTTGCCAGCAACGGCATGTGTGCCACATCACATCCGCTGGCTGC AAAAACCGCGGTTGATGTTCTGCAACAAGGCGGCAATGCGATGGATGCCGCCATCGCGGGCGCTGTCCTGCTGGGCCTGT GCGAACCGGCGATGACGGGTATTGGCGGTGATTGCTTTGTTCTTTGGTCTGATCGTGATCGCCAGAATGTGCGTGCGTTG AACGGATCAGGACGCGCGCCCGCAGCTTTGGATGCGCATGATCTGCGCGAGGCCGGCGAAACCACCGTTCCATCCTTTTC GGCCCATGCCGTGACCATTCCCACAGCGGTTGCCGCTTTTGCCCATCTGGCGGAAACAGTCGGCACCCTCGGTCTCGACA GGCTGCTGGCGCCCTCGATCAAATACGCCCAGGAAGGTATCCCGGTCGCACCTCGCGTGGCCTTTGACTGGGAAAACTAT GGCCACAACCTGCAAGGCAGTGCGCGGGAACAATACCTGATCGACGGAAAACTCCTGAAAACCGGTGATATCTTCCGCGC CCCCGGTCAGGCGGAGGTCTTGCGCCGCATCGCCGAACAAGGCGCGTCGGCTTTTTACACCGGCGAAATTGCCGAAGACA TGGTGGCCACTCTTCAGGCAGCGGGCGGTGTGCACACATTGGATGATTTCGCGGCCGCAGCCTGTGACGAGACCACGCCA ATCTTCGGCACCTACAAGGACATCGACATCGTTGAACATCCCCCCAACGGTCAAGGGGCTACCGCGATCCTGATGCTCAA CATCCTCGCGCAGTTTGACCTAGCGTCGATGGCGCCTTTTGGCACCCAACGCGCACATATCGAGGCAGAGGCGGCGAAAC TGGCCTATGATGCCCGCAACCGTTTCCTTGCGGATGCCGATCATACCACGCGGCTGGCGCATATGCTGGATATGTCGCTT GCCAAAAAACTGGCCGCGATGATTGATCCGGGCAAAGCGATGCCAGCGGCCGCCCCGTTGACGGAAATGGTCCACAAGGA CACCGTCTATATTTCCACCGTGGACCGCGATGGAATGGCCGTGTCGCTGATCTATTCAATCTTCAAGGATTTCGGCTCGG GCATCGCCTCTGATAAATTCGGGATTCTGTTACAGAACCGCGGGGCGGGATTTACGCTCGAACAGGGGCACCCGAATGAG CTCAAGGGCGGCAAGCGTCCGATGCACACCATTATCCCTGCGATGCTGCGCAAGAACGGCAAGGTGATCATGCCGTTCGG CGTCATGGGCGGGGCCTACCAGCCGAACGGACATGCGCGGTTTGTAACCAACCTCACCGACTTTGGCATGGACCCGCAAG CGACCATTGATGCACCGCGCGCCTTTTCCGACATGGGCAATATGCAGGTTGAACGGGGCTATAGTGATGCAGTGCGCCAG GAACTGACCGATCTGGGTCACTCGGTGAGCATACCCCAGACGGCAATCGGCGGGGCACAGGCGATCATGATGCATGACAA TGGCGTTCTTGAGGGCGCGAGTGATCCGCGCAAAGATGGCTGCGCCCTGGGCTACTGA
Upstream 100 bases:
>100_bases CTCCCCTTTGAGAACACTGATTTATCCCGTCATGGGTCGTGGACTTCCATCCCGAAGTCGCTAGTTTACGCGCAGAATTA TCATGACCAAAGGCCCTCAC
Downstream 100 bases:
>100_bases TCAAGCGCTCAGTTGAGCTGAAAATGCAACGGATAGCTGCCATCCTGTAGCGGGCCGAACAGATCGGGGATATCGGGGTG ATCCACCGGTTCGCCTGAAT
Product: gamma-glutamyltranspeptidase, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 525; Mature: 525
Protein sequence:
>525_residues MRDFHLPGRSPVLASNGMCATSHPLAAKTAVDVLQQGGNAMDAAIAGAVLLGLCEPAMTGIGGDCFVLWSDRDRQNVRAL NGSGRAPAALDAHDLREAGETTVPSFSAHAVTIPTAVAAFAHLAETVGTLGLDRLLAPSIKYAQEGIPVAPRVAFDWENY GHNLQGSAREQYLIDGKLLKTGDIFRAPGQAEVLRRIAEQGASAFYTGEIAEDMVATLQAAGGVHTLDDFAAAACDETTP IFGTYKDIDIVEHPPNGQGATAILMLNILAQFDLASMAPFGTQRAHIEAEAAKLAYDARNRFLADADHTTRLAHMLDMSL AKKLAAMIDPGKAMPAAAPLTEMVHKDTVYISTVDRDGMAVSLIYSIFKDFGSGIASDKFGILLQNRGAGFTLEQGHPNE LKGGKRPMHTIIPAMLRKNGKVIMPFGVMGGAYQPNGHARFVTNLTDFGMDPQATIDAPRAFSDMGNMQVERGYSDAVRQ ELTDLGHSVSIPQTAIGGAQAIMMHDNGVLEGASDPRKDGCALGY
Sequences:
>Translated_525_residues MRDFHLPGRSPVLASNGMCATSHPLAAKTAVDVLQQGGNAMDAAIAGAVLLGLCEPAMTGIGGDCFVLWSDRDRQNVRAL NGSGRAPAALDAHDLREAGETTVPSFSAHAVTIPTAVAAFAHLAETVGTLGLDRLLAPSIKYAQEGIPVAPRVAFDWENY GHNLQGSAREQYLIDGKLLKTGDIFRAPGQAEVLRRIAEQGASAFYTGEIAEDMVATLQAAGGVHTLDDFAAAACDETTP IFGTYKDIDIVEHPPNGQGATAILMLNILAQFDLASMAPFGTQRAHIEAEAAKLAYDARNRFLADADHTTRLAHMLDMSL AKKLAAMIDPGKAMPAAAPLTEMVHKDTVYISTVDRDGMAVSLIYSIFKDFGSGIASDKFGILLQNRGAGFTLEQGHPNE LKGGKRPMHTIIPAMLRKNGKVIMPFGVMGGAYQPNGHARFVTNLTDFGMDPQATIDAPRAFSDMGNMQVERGYSDAVRQ ELTDLGHSVSIPQTAIGGAQAIMMHDNGVLEGASDPRKDGCALGY >Mature_525_residues MRDFHLPGRSPVLASNGMCATSHPLAAKTAVDVLQQGGNAMDAAIAGAVLLGLCEPAMTGIGGDCFVLWSDRDRQNVRAL NGSGRAPAALDAHDLREAGETTVPSFSAHAVTIPTAVAAFAHLAETVGTLGLDRLLAPSIKYAQEGIPVAPRVAFDWENY GHNLQGSAREQYLIDGKLLKTGDIFRAPGQAEVLRRIAEQGASAFYTGEIAEDMVATLQAAGGVHTLDDFAAAACDETTP IFGTYKDIDIVEHPPNGQGATAILMLNILAQFDLASMAPFGTQRAHIEAEAAKLAYDARNRFLADADHTTRLAHMLDMSL AKKLAAMIDPGKAMPAAAPLTEMVHKDTVYISTVDRDGMAVSLIYSIFKDFGSGIASDKFGILLQNRGAGFTLEQGHPNE LKGGKRPMHTIIPAMLRKNGKVIMPFGVMGGAYQPNGHARFVTNLTDFGMDPQATIDAPRAFSDMGNMQVERGYSDAVRQ ELTDLGHSVSIPQTAIGGAQAIMMHDNGVLEGASDPRKDGCALGY
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=561, Percent_Identity=28.3422459893048, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI73915090, Length=561, Percent_Identity=28.3422459893048, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI73915096, Length=561, Percent_Identity=28.3422459893048, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI73915094, Length=561, Percent_Identity=28.3422459893048, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI113429324, Length=532, Percent_Identity=27.8195488721804, Blast_Score=139, Evalue=5e-33, Organism=Homo sapiens, GI113429326, Length=537, Percent_Identity=27.56052141527, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI109148539, Length=453, Percent_Identity=28.476821192053, Blast_Score=119, Evalue=9e-27, Organism=Homo sapiens, GI153266885, Length=534, Percent_Identity=25.4681647940075, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI153266901, Length=535, Percent_Identity=25.4205607476636, Blast_Score=106, Evalue=6e-23, Organism=Homo sapiens, GI153266907, Length=535, Percent_Identity=25.0467289719626, Blast_Score=92, Evalue=9e-19, Organism=Escherichia coli, GI1789856, Length=541, Percent_Identity=32.902033271719, Blast_Score=234, Evalue=7e-63, Organism=Caenorhabditis elegans, GI72000294, Length=480, Percent_Identity=24.375, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI212646519, Length=480, Percent_Identity=24.375, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17506189, Length=528, Percent_Identity=24.0530303030303, Blast_Score=109, Evalue=4e-24, Organism=Caenorhabditis elegans, GI193208245, Length=547, Percent_Identity=23.5831809872029, Blast_Score=108, Evalue=8e-24, Organism=Caenorhabditis elegans, GI193208247, Length=547, Percent_Identity=23.5831809872029, Blast_Score=108, Evalue=9e-24, Organism=Caenorhabditis elegans, GI17542894, Length=510, Percent_Identity=24.9019607843137, Blast_Score=103, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6323330, Length=548, Percent_Identity=22.0802919708029, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI18859893, Length=491, Percent_Identity=26.2729124236253, Blast_Score=106, Evalue=3e-23, Organism=Drosophila melanogaster, GI161077878, Length=538, Percent_Identity=23.7918215613383, Blast_Score=106, Evalue=4e-23, Organism=Drosophila melanogaster, GI18859741, Length=536, Percent_Identity=23.3208955223881, Blast_Score=106, Evalue=5e-23, Organism=Drosophila melanogaster, GI161077880, Length=538, Percent_Identity=23.7918215613383, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI24642670, Length=538, Percent_Identity=23.7918215613383, Blast_Score=105, Evalue=6e-23, Organism=Drosophila melanogaster, GI24642666, Length=538, Percent_Identity=23.7918215613383, Blast_Score=105, Evalue=6e-23, Organism=Drosophila melanogaster, GI45551474, Length=538, Percent_Identity=23.7918215613383, Blast_Score=105, Evalue=6e-23, Organism=Drosophila melanogaster, GI161077496, Length=452, Percent_Identity=24.5575221238938, Blast_Score=86, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 55652; Mature: 55652
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDFHLPGRSPVLASNGMCATSHPLAAKTAVDVLQQGGNAMDAAIAGAVLLGLCEPAMTG CCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC IGGDCFVLWSDRDRQNVRALNGSGRAPAALDAHDLREAGETTVPSFSAHAVTIPTAVAAF CCCCEEEEECCCCCCCHHEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEHHHHHHHH AHLAETVGTLGLDRLLAPSIKYAQEGIPVAPRVAFDWENYGHNLQGSAREQYLIDGKLLK HHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEECHHHCCCCCCCCCCCEEEECCEEEE TGDIFRAPGQAEVLRRIAEQGASAFYTGEIAEDMVATLQAAGGVHTLDDFAAAACDETTP CCCCEECCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC IFGTYKDIDIVEHPPNGQGATAILMLNILAQFDLASMAPFGTQRAHIEAEAAKLAYDARN CEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHEEHHHHHHHHHHHHH RFLADADHTTRLAHMLDMSLAKKLAAMIDPGKAMPAAAPLTEMVHKDTVYISTVDRDGMA CEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCHH VSLIYSIFKDFGSGIASDKFGILLQNRGAGFTLEQGHPNELKGGKRPMHTIIPAMLRKNG HHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEECCCCCHHCCCCCCCHHHHHHHHHHCCC KVIMPFGVMGGAYQPNGHARFVTNLTDFGMDPQATIDAPRAFSDMGNMQVERGYSDAVRQ CEEEEEECCCCCCCCCCCEEEEECHHHCCCCCCCCCCCCHHHHHHCCCEECCCHHHHHHH ELTDLGHSVSIPQTAIGGAQAIMMHDNGVLEGASDPRKDGCALGY HHHHCCCCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRDFHLPGRSPVLASNGMCATSHPLAAKTAVDVLQQGGNAMDAAIAGAVLLGLCEPAMTG CCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC IGGDCFVLWSDRDRQNVRALNGSGRAPAALDAHDLREAGETTVPSFSAHAVTIPTAVAAF CCCCEEEEECCCCCCCHHEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEHHHHHHHH AHLAETVGTLGLDRLLAPSIKYAQEGIPVAPRVAFDWENYGHNLQGSAREQYLIDGKLLK HHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEECHHHCCCCCCCCCCCEEEECCEEEE TGDIFRAPGQAEVLRRIAEQGASAFYTGEIAEDMVATLQAAGGVHTLDDFAAAACDETTP CCCCEECCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC IFGTYKDIDIVEHPPNGQGATAILMLNILAQFDLASMAPFGTQRAHIEAEAAKLAYDARN CEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHEEHHHHHHHHHHHHH RFLADADHTTRLAHMLDMSLAKKLAAMIDPGKAMPAAAPLTEMVHKDTVYISTVDRDGMA CEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCHH VSLIYSIFKDFGSGIASDKFGILLQNRGAGFTLEQGHPNELKGGKRPMHTIIPAMLRKNG HHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEECCCCCHHCCCCCCCHHHHHHHHHHCCC KVIMPFGVMGGAYQPNGHARFVTNLTDFGMDPQATIDAPRAFSDMGNMQVERGYSDAVRQ CEEEEEECCCCCCCCCCCEEEEECHHHCCCCCCCCCCCCHHHHHHCCCEECCCHHHHHHH ELTDLGHSVSIPQTAIGGAQAIMMHDNGVLEGASDPRKDGCALGY HHHHCCCCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]