Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is rsbW

Identifier: 110677446

GI number: 110677446

Start: 27055

End: 27501

Strand: Direct

Name: rsbW

Synonym: RD1_0027

Alternate gene names: NA

Gene position: 27055-27501 (Clockwise)

Preceding gene: 110677445

Following gene: 110677447

Centisome position: 0.65

GC content: 53.91

Gene sequence:

>447_bases
ATGGAATCGGAACAACTCCGTCCATTTAGAGTCTGCGTCGAAAGCGGACAATACGCAGCAAGAGAAGCTCTGCGCGAGTT
TCTTGATGCATTGCGCCCTCTGAAACTGGACGTTGAAGAATCCGGCACCATCGAACTGGTACTGGCCGAGGTATTGAACA
ACATCGTTGAACATGCCTACCCGCCGTCACAACCCTCCGGCCCCATCGCGATCGAGTGCGCACACCGCCAAGACGGTCTG
ATCCTGAAGATCAAGGATGAAGGACATGCAATGCCGGATGGCAAAATGCCTCTGGGCGAACTGACGCCCCTCGATGTGGA
ATTGGAAGACATGCCAGAGGGCGGATTTGGATGGTTTCTCATTTCACATCTTGCAAAAGACGTCCGGTATGCGCGTGTCG
GGCATGAAAACCACCTGAACATGCGCCTCGCAGTAGGCACGTCATAA

Upstream 100 bases:

>100_bases
CCCTGACACGAATGGACTCGGTCTTTAGTGTCTTTCCGACCTTGGAAGGCGCTTTGGCTGAATTAAAGCCGCAACAGACG
TGCCAATAAGGAGCGAGTAA

Downstream 100 bases:

>100_bases
CGTTTTCACCAACGGCATCCCTTTTTCACGGCGCCTTCCTCAAACGGCCCCGTTTTGGACATATTCCTGCCTTTTTTCAG
CATCACTCTGAAACGCGTAG

Product: serine-protein kinase, putative

Products: NA

Alternate protein names: Anti-Sigma B Factor; Anti-Sigma Regulatory Factor; Anti-Sigma Regulatory Kinase

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MESEQLRPFRVCVESGQYAAREALREFLDALRPLKLDVEESGTIELVLAEVLNNIVEHAYPPSQPSGPIAIECAHRQDGL
ILKIKDEGHAMPDGKMPLGELTPLDVELEDMPEGGFGWFLISHLAKDVRYARVGHENHLNMRLAVGTS

Sequences:

>Translated_148_residues
MESEQLRPFRVCVESGQYAAREALREFLDALRPLKLDVEESGTIELVLAEVLNNIVEHAYPPSQPSGPIAIECAHRQDGL
ILKIKDEGHAMPDGKMPLGELTPLDVELEDMPEGGFGWFLISHLAKDVRYARVGHENHLNMRLAVGTS
>Mature_148_residues
MESEQLRPFRVCVESGQYAAREALREFLDALRPLKLDVEESGTIELVLAEVLNNIVEHAYPPSQPSGPIAIECAHRQDGL
ILKIKDEGHAMPDGKMPLGELTPLDVELEDMPEGGFGWFLISHLAKDVRYARVGHENHLNMRLAVGTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16454; Mature: 16454

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESEQLRPFRVCVESGQYAAREALREFLDALRPLKLDVEESGTIELVLAEVLNNIVEHAY
CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHCC
PPSQPSGPIAIECAHRQDGLILKIKDEGHAMPDGKMPLGELTPLDVELEDMPEGGFGWFL
CCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHH
ISHLAKDVRYARVGHENHLNMRLAVGTS
HHHHHHHHHHHHCCCCCCCEEEEEECCC
>Mature Secondary Structure
MESEQLRPFRVCVESGQYAAREALREFLDALRPLKLDVEESGTIELVLAEVLNNIVEHAY
CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHCC
PPSQPSGPIAIECAHRQDGLILKIKDEGHAMPDGKMPLGELTPLDVELEDMPEGGFGWFL
CCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHH
ISHLAKDVRYARVGHENHLNMRLAVGTS
HHHHHHHHHHHHCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA