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The map label for this gene is 110677425

Identifier: 110677425

GI number: 110677425

Start: 4551

End: 5618

Strand: Direct

Name: 110677425

Synonym: RD1_0006

Alternate gene names: NA

Gene position: 4551-5618 (Clockwise)

Preceding gene: 110677424

Following gene: 110677427

Centisome position: 0.11

GC content: 58.05

Gene sequence:

>1068_bases
ATGACGATACAATTCAACACCGAAACGTTCCGCGACGACTATTCCTTCCGCAACTCGGACTGGGCGATCAAACGCTTCCC
GTTTCCGTTCCACGAAGACAGCTATATGTATTCGGTCAACATGGAGCAGCATCGCGGCGGACCGAAGGGGTCGGTCTACG
AAATGCGGTTCGATGTCGATGAGCACTATGTCTCGGAGATGGCAGACCGCGCCATTGTGCTGGCGGAGGATCCGCTGCGG
TGCCAGTCGCTGCCGCATATGACGCTGGCGGGCTGGGACACGCTGGAGCTGATCATGGTCAGTAAATCAGAGGATTACCC
CGACCTGTTCGAGTTGCACCGCGACGGTAATCGCTGGCGCTGGATCAACAAGCCAATGGACATTGATCACACCTTTACAT
TCCTGGATGAGACCACGCTTCCCTGCGGGCCGCTGGAATACATCACCCGTCAGGCACAGGGCGATTACGCCGTGCTCGAT
CAGCGCGATGACATGCTTTACATGGACGCCGGCATGGTAACGACGCAGGCGGACTGGAGCCTCGATTTCGACATCGGCAT
GGATTTTTTCGAATGGCACGCGCCGGTGCCGCTGGCGCATGAAATGGGTATTTTCAAGCGCGCGTTGAAATTCCTGCTCA
ACATCCAGCAGGGCGCGCCCGCCCGGCGGCTGAACTGGACGATGACGGTAAACCCCCTGCTCGATACAAGCCCAGAGAAC
TATCACAAATGGGGTGTGCAAAAGACGACGCTGACGCCGGAAAACATCGGTTCCAAACAGCATTTGCGGGTGGAGTTGCA
AACCTTCTACCGTTTGCCGCGGTCCAATGCGCTGCTGTTCCCGATCCGCTGTTACCTGATCTCGTTTCAGGATCTGGTGA
CGATCCCGAAATGGGGCCGCCGTCTGCACCGCGTCATCCGCGACCTGCCCGAGGAACTGGCGACCTACAAGGGCTTCATC
GACAACCGTCCGTTGATGCTGGACTATCTCAGCCGGTATGACGACGGTTTGCCGACATCGCCCGGCGTCTGGCCGGACCT
CGACACCGAGCCGTCCTTGCAAAAGTAG

Upstream 100 bases:

>100_bases
GGCTGGAAGAAGAAGAACACGCCAGCGGCAAGAAAATCATGCCATGCGTCAGCCGCTTTGTCGGCAAAACGCTGGTTCTG
GATCGATAGGGAGGTCCTTT

Downstream 100 bases:

>100_bases
GATCGGATAATGCCGGGTGCGGATCGCCCGCCCGGCCTGCTCAGCTTCTCTGCGGGTAGCAGATCACCGACAGGTAACGC
GCGGGCAATTCGATCAGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MTIQFNTETFRDDYSFRNSDWAIKRFPFPFHEDSYMYSVNMEQHRGGPKGSVYEMRFDVDEHYVSEMADRAIVLAEDPLR
CQSLPHMTLAGWDTLELIMVSKSEDYPDLFELHRDGNRWRWINKPMDIDHTFTFLDETTLPCGPLEYITRQAQGDYAVLD
QRDDMLYMDAGMVTTQADWSLDFDIGMDFFEWHAPVPLAHEMGIFKRALKFLLNIQQGAPARRLNWTMTVNPLLDTSPEN
YHKWGVQKTTLTPENIGSKQHLRVELQTFYRLPRSNALLFPIRCYLISFQDLVTIPKWGRRLHRVIRDLPEELATYKGFI
DNRPLMLDYLSRYDDGLPTSPGVWPDLDTEPSLQK

Sequences:

>Translated_355_residues
MTIQFNTETFRDDYSFRNSDWAIKRFPFPFHEDSYMYSVNMEQHRGGPKGSVYEMRFDVDEHYVSEMADRAIVLAEDPLR
CQSLPHMTLAGWDTLELIMVSKSEDYPDLFELHRDGNRWRWINKPMDIDHTFTFLDETTLPCGPLEYITRQAQGDYAVLD
QRDDMLYMDAGMVTTQADWSLDFDIGMDFFEWHAPVPLAHEMGIFKRALKFLLNIQQGAPARRLNWTMTVNPLLDTSPEN
YHKWGVQKTTLTPENIGSKQHLRVELQTFYRLPRSNALLFPIRCYLISFQDLVTIPKWGRRLHRVIRDLPEELATYKGFI
DNRPLMLDYLSRYDDGLPTSPGVWPDLDTEPSLQK
>Mature_354_residues
TIQFNTETFRDDYSFRNSDWAIKRFPFPFHEDSYMYSVNMEQHRGGPKGSVYEMRFDVDEHYVSEMADRAIVLAEDPLRC
QSLPHMTLAGWDTLELIMVSKSEDYPDLFELHRDGNRWRWINKPMDIDHTFTFLDETTLPCGPLEYITRQAQGDYAVLDQ
RDDMLYMDAGMVTTQADWSLDFDIGMDFFEWHAPVPLAHEMGIFKRALKFLLNIQQGAPARRLNWTMTVNPLLDTSPENY
HKWGVQKTTLTPENIGSKQHLRVELQTFYRLPRSNALLFPIRCYLISFQDLVTIPKWGRRLHRVIRDLPEELATYKGFID
NRPLMLDYLSRYDDGLPTSPGVWPDLDTEPSLQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41738; Mature: 41607

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIQFNTETFRDDYSFRNSDWAIKRFPFPFHEDSYMYSVNMEQHRGGPKGSVYEMRFDVD
CEEEECCHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEEEHHHHCCCCCCCEEEEEECCH
EHYVSEMADRAIVLAEDPLRCQSLPHMTLAGWDTLELIMVSKSEDYPDLFELHRDGNRWR
HHHHHHHHCCEEEEECCCHHHHCCCCCEEECCCEEEEEEEECCCCCHHHHHHHCCCCEEE
WINKPMDIDHTFTFLDETTLPCGPLEYITRQAQGDYAVLDQRDDMLYMDAGMVTTQADWS
EECCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCEEEEECCEEEECCCCE
LDFDIGMDFFEWHAPVPLAHEMGIFKRALKFLLNIQQGAPARRLNWTMTVNPLLDTSPEN
EEHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCC
YHKWGVQKTTLTPENIGSKQHLRVELQTFYRLPRSNALLFPIRCYLISFQDLVTIPKWGR
HHHCCCEEEECCHHHCCCCCEEEEEEHHHHCCCCCCEEEEEHHEEEECHHHHHCCCHHHH
RLHRVIRDLPEELATYKGFIDNRPLMLDYLSRYDDGLPTSPGVWPDLDTEPSLQK
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TIQFNTETFRDDYSFRNSDWAIKRFPFPFHEDSYMYSVNMEQHRGGPKGSVYEMRFDVD
EEEECCHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEEEHHHHCCCCCCCEEEEEECCH
EHYVSEMADRAIVLAEDPLRCQSLPHMTLAGWDTLELIMVSKSEDYPDLFELHRDGNRWR
HHHHHHHHCCEEEEECCCHHHHCCCCCEEECCCEEEEEEEECCCCCHHHHHHHCCCCEEE
WINKPMDIDHTFTFLDETTLPCGPLEYITRQAQGDYAVLDQRDDMLYMDAGMVTTQADWS
EECCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCEEEEECCEEEECCCCE
LDFDIGMDFFEWHAPVPLAHEMGIFKRALKFLLNIQQGAPARRLNWTMTVNPLLDTSPEN
EEHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCC
YHKWGVQKTTLTPENIGSKQHLRVELQTFYRLPRSNALLFPIRCYLISFQDLVTIPKWGR
HHHCCCEEEECCHHHCCCCCEEEEEEHHHHCCCCCCEEEEEHHEEEECHHHHHCCCHHHH
RLHRVIRDLPEELATYKGFIDNRPLMLDYLSRYDDGLPTSPGVWPDLDTEPSLQK
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA