| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is yngB [H]
Identifier: 108801254
GI number: 108801254
Start: 4558031
End: 4558903
Strand: Reverse
Name: yngB [H]
Synonym: Mmcs_4290
Alternate gene names: 108801254
Gene position: 4558903-4558031 (Counterclockwise)
Preceding gene: 108801260
Following gene: 108801253
Centisome position: 79.9
GC content: 68.16
Gene sequence:
>873_bases GTGCCCGCCGCAGGCCTGGGCACGCGTTTCCTCCCCGCCACCAAGACGGTGCCCAAGGAATTGCTGCCGGTCGTGGACAC CCCCGGGATCGAGTTGGTGGCCGCCGAGGCCGCGGAGGCGGGCGCCGAACGGCTCGTCATCATCACGTCCGAGGGCAAGG ACGGCGTGGTCGCGCACTTCGTCGAGGACCTGGTGCTCGAGGGGACGCTCGAGGCCCGCGGTAAGAAGACCATGCTCGAG AAGGTGCGGCGCGCGCCCGCGCTGATCAAGGTGGAATCGGTGGTTCAGGCCGAACCGCTCGGCCTCGGTCACGCCGTCAG CTGCGTGGAGCCCACGCTGTCCGACGACGAGGATGCGATCGCGGTGCTGCTGCCCGACGACCTCGTGCTGCCGACCGGTG TTCTCGAGACGATGTCGAAGGTGCGCGCGAAACGCGGCGGTTCGGTGTTGTGCGCGATCGAGGTGCCGCCCGAGAAGATC AGCGCCTACGGCGTATTCGACGTCGAAGAGGTGCCCGACGCCACCAACCCCAACGTCCTGCGCGTCAAGGGGATGGTCGA GAAACCCAAGGCCGAGGATGCCCCGTCGCCGTACGCCGCGGCCGGCCGCTACGTGTTGGACCGAGCGATCTTCGACGCGC TGCGACGTGTCAAGCGGGGTGCGGGCAACGAGATCCAGCTGACCGACGCGATCGCGCTGCTGATCGAGGAGGGCCATCCG GTGCACGTGGTGGTCCACCGCGGAACCCGACACGACCTGGGAAATCCCGGCGGCTACCTCAAGGCTGCGGTTGACTTTGC GTTGGAACGCGACGACTACGGCCCCGAGCTGCGGCAGTGGTTGGTCGAGCGATTGGGCCTGACCGAGAACTAG
Upstream 100 bases:
>100_bases CGCGAAATCGAGGTGCCGCCATAACGGGTTCAACCTGCGCCCAACGGTTAATCTGTCTGCGATGAGTCGGCCAGAAGTAC CCATTCCGTATACCGCTGTC
Downstream 100 bases:
>100_bases ATCTGCGCGACAGGCCCGACAGAGGTGGAGAAAGGCGTGTTGTGCGTTCGGTTGAGGAGCAGCAGGCTCGGATAGCGGCC GCCGCGGTGGCTCCGCGACC
Product: UDP-glucose pyrophosphorylase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MPAAGLGTRFLPATKTVPKELLPVVDTPGIELVAAEAAEAGAERLVIITSEGKDGVVAHFVEDLVLEGTLEARGKKTMLE KVRRAPALIKVESVVQAEPLGLGHAVSCVEPTLSDDEDAIAVLLPDDLVLPTGVLETMSKVRAKRGGSVLCAIEVPPEKI SAYGVFDVEEVPDATNPNVLRVKGMVEKPKAEDAPSPYAAAGRYVLDRAIFDALRRVKRGAGNEIQLTDAIALLIEEGHP VHVVVHRGTRHDLGNPGGYLKAAVDFALERDDYGPELRQWLVERLGLTEN
Sequences:
>Translated_290_residues MPAAGLGTRFLPATKTVPKELLPVVDTPGIELVAAEAAEAGAERLVIITSEGKDGVVAHFVEDLVLEGTLEARGKKTMLE KVRRAPALIKVESVVQAEPLGLGHAVSCVEPTLSDDEDAIAVLLPDDLVLPTGVLETMSKVRAKRGGSVLCAIEVPPEKI SAYGVFDVEEVPDATNPNVLRVKGMVEKPKAEDAPSPYAAAGRYVLDRAIFDALRRVKRGAGNEIQLTDAIALLIEEGHP VHVVVHRGTRHDLGNPGGYLKAAVDFALERDDYGPELRQWLVERLGLTEN >Mature_289_residues PAAGLGTRFLPATKTVPKELLPVVDTPGIELVAAEAAEAGAERLVIITSEGKDGVVAHFVEDLVLEGTLEARGKKTMLEK VRRAPALIKVESVVQAEPLGLGHAVSCVEPTLSDDEDAIAVLLPDDLVLPTGVLETMSKVRAKRGGSVLCAIEVPPEKIS AYGVFDVEEVPDATNPNVLRVKGMVEKPKAEDAPSPYAAAGRYVLDRAIFDALRRVKRGAGNEIQLTDAIALLIEEGHPV HVVVHRGTRHDLGNPGGYLKAAVDFALERDDYGPELRQWLVERLGLTEN
Specific function: Catalyzes the formation of UDP-glucose from glucose-1- phosphate and UTP. This is an intermediate step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG) [H]
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=294, Percent_Identity=40.4761904761905, Blast_Score=187, Evalue=7e-49, Organism=Escherichia coli, GI1788355, Length=287, Percent_Identity=34.8432055749129, Blast_Score=145, Evalue=2e-36,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 31032; Mature: 30901
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAGLGTRFLPATKTVPKELLPVVDTPGIELVAAEAAEAGAERLVIITSEGKDGVVAHF CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEECCHHHCCCCEEEEEECCCCCCHHHHH VEDLVLEGTLEARGKKTMLEKVRRAPALIKVESVVQAEPLGLGHAVSCVEPTLSDDEDAI HHHHHHHCCHHHCCHHHHHHHHHHCCCEEEEHHHHHCCCCCCCCCHHHCCCCCCCCCCEE AVLLPDDLVLPTGVLETMSKVRAKRGGSVLCAIEVPPEKISAYGVFDVEEVPDATNPNVL EEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHCEECCEEHHHCCCCCCCCEE RVKGMVEKPKAEDAPSPYAAAGRYVLDRAIFDALRRVKRGAGNEIQLTDAIALLIEEGHP EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHEEEECCCCC VHVVVHRGTRHDLGNPGGYLKAAVDFALERDDYGPELRQWLVERLGLTEN EEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure PAAGLGTRFLPATKTVPKELLPVVDTPGIELVAAEAAEAGAERLVIITSEGKDGVVAHF CCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEECCHHHCCCCEEEEEECCCCCCHHHHH VEDLVLEGTLEARGKKTMLEKVRRAPALIKVESVVQAEPLGLGHAVSCVEPTLSDDEDAI HHHHHHHCCHHHCCHHHHHHHHHHCCCEEEEHHHHHCCCCCCCCCHHHCCCCCCCCCCEE AVLLPDDLVLPTGVLETMSKVRAKRGGSVLCAIEVPPEKISAYGVFDVEEVPDATNPNVL EEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHCEECCEEHHHCCCCCCCCEE RVKGMVEKPKAEDAPSPYAAAGRYVLDRAIFDALRRVKRGAGNEIQLTDAIALLIEEGHP EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHEEEECCCCC VHVVVHRGTRHDLGNPGGYLKAAVDFALERDDYGPELRQWLVERLGLTEN EEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]