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The map label for this gene is 108801260

Identifier: 108801260

GI number: 108801260

Start: 4562976

End: 4563626

Strand: Reverse

Name: 108801260

Synonym: Mmcs_4296

Alternate gene names: NA

Gene position: 4563626-4562976 (Counterclockwise)

Preceding gene: 108801261

Following gene: 108801254

Centisome position: 79.99

GC content: 65.44

Gene sequence:

>651_bases
ATGAAGGCAATCAGTCGGGTGCTGATCGCGTTGGTGGCGGCCATCGCGGCTCTGTTCACGAGCACGGGCACCTCCAACGC
GGGTCTGGACAATGAGCTCAGCCTGGTCGACGGGCAGGGCCGGACGCTGACGATTCAGCAGTGGGACACGTTCCTCAACG
GGGTGTTCCCGTTGGACCGCAACCGGCTCACCCGTGAGTGGTTCCACTCGGGTCGGGCGAAGTACATCGTGGCCGGTGAG
GGTGCCGAGGACTTCGAGGGTTCACTCGAGCTGGGTTACCAGATCGGCTTCCCGTGGTCGTTGGGTGTGGGGATCAACTT
CAGCTACACCACCCCCAACATCGCCTTCGATGGCGAGGTTCTTGATGTCACCGGCGGTGTCGGCGGGATCGTGCCGCTCG
ATGCCATTGTGACCCCGCCGTTGTTCCCGGGTGTGTCGATCAGCGCCGATCTGGGCAACGGCCCGGGCATTCAGGAGGTG
GCGACCTTCGCGGTCGACGTGGAGGGTGCCGAGGGTGCGGTCGCGGTGTCGAACGCTCACGGCACGGTGACCGGTGCGGC
CGGTGGCGTGCTGCTGCGTCCCTACGCCCGGCTGATCGCCTCGACCGGTGACAGCGTCACCACCTACGGCGAACCCTGGA
ACATGAACTGA

Upstream 100 bases:

>100_bases
GTGCGGATTCTCATCTCAGCCACATGTTGGGCTCATGGGTGTGTGGTCTCCAGGCGACCAGGCGCCCGACGAAATATTCG
GCGCGACAGCTAGGGAGATC

Downstream 100 bases:

>100_bases
GTTCCATCACGACAGCGAACAGCCCCCGGAGAAAGGCGGTTTCGAGGGGTCGTCGCAACACTGCTGGTTAATTGGTCAGT
AGTAGATCACGCAGGCGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Porin Protein MspA; MspD Protein

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MKAISRVLIALVAAIAALFTSTGTSNAGLDNELSLVDGQGRTLTIQQWDTFLNGVFPLDRNRLTREWFHSGRAKYIVAGE
GAEDFEGSLELGYQIGFPWSLGVGINFSYTTPNIAFDGEVLDVTGGVGGIVPLDAIVTPPLFPGVSISADLGNGPGIQEV
ATFAVDVEGAEGAVAVSNAHGTVTGAAGGVLLRPYARLIASTGDSVTTYGEPWNMN

Sequences:

>Translated_216_residues
MKAISRVLIALVAAIAALFTSTGTSNAGLDNELSLVDGQGRTLTIQQWDTFLNGVFPLDRNRLTREWFHSGRAKYIVAGE
GAEDFEGSLELGYQIGFPWSLGVGINFSYTTPNIAFDGEVLDVTGGVGGIVPLDAIVTPPLFPGVSISADLGNGPGIQEV
ATFAVDVEGAEGAVAVSNAHGTVTGAAGGVLLRPYARLIASTGDSVTTYGEPWNMN
>Mature_216_residues
MKAISRVLIALVAAIAALFTSTGTSNAGLDNELSLVDGQGRTLTIQQWDTFLNGVFPLDRNRLTREWFHSGRAKYIVAGE
GAEDFEGSLELGYQIGFPWSLGVGINFSYTTPNIAFDGEVLDVTGGVGGIVPLDAIVTPPLFPGVSISADLGNGPGIQEV
ATFAVDVEGAEGAVAVSNAHGTVTGAAGGVLLRPYARLIASTGDSVTTYGEPWNMN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22446; Mature: 22446

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAISRVLIALVAAIAALFTSTGTSNAGLDNELSLVDGQGRTLTIQQWDTFLNGVFPLDR
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEEHHHHHCCCCCCCC
NRLTREWFHSGRAKYIVAGEGAEDFEGSLELGYQIGFPWSLGVGINFSYTTPNIAFDGEV
CHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCEEECCCEEEEECCCCEEECCEE
LDVTGGVGGIVPLDAIVTPPLFPGVSISADLGNGPGIQEVATFAVDVEGAEGAVAVSNAH
EEECCCCCCCEEHHHHCCCCCCCCCEEEECCCCCCCHHHHEEEEEEECCCCCEEEEECCC
GTVTGAAGGVLLRPYARLIASTGDSVTTYGEPWNMN
CEEECCCCCCHHHHHHHHHHCCCCCEEECCCCCCCC
>Mature Secondary Structure
MKAISRVLIALVAAIAALFTSTGTSNAGLDNELSLVDGQGRTLTIQQWDTFLNGVFPLDR
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEEHHHHHCCCCCCCC
NRLTREWFHSGRAKYIVAGEGAEDFEGSLELGYQIGFPWSLGVGINFSYTTPNIAFDGEV
CHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCEEECCCEEEEECCCCEEECCEE
LDVTGGVGGIVPLDAIVTPPLFPGVSISADLGNGPGIQEVATFAVDVEGAEGAVAVSNAH
EEECCCCCCCEEHHHHCCCCCCCCCEEEECCCCCCCHHHHEEEEEEECCCCCEEEEECCC
GTVTGAAGGVLLRPYARLIASTGDSVTTYGEPWNMN
CEEECCCCCCHHHHHHHHHHCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA