| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is yceI [C]
Identifier: 108800995
GI number: 108800995
Start: 4296466
End: 4297014
Strand: Reverse
Name: yceI [C]
Synonym: Mmcs_4031
Alternate gene names: 108800995
Gene position: 4297014-4296466 (Counterclockwise)
Preceding gene: 108800996
Following gene: 108800994
Centisome position: 75.31
GC content: 65.94
Gene sequence:
>549_bases ATGACCGCTGCAACCACCACGGCATTGAGCGCAGGAACCTGGGCCATCGACCCGGTGCACTCGACCATCGGCTTTTCCGT CCGCCACCTCATGGTGAGCAAGGTGCGCGGCACCTTCGACGACTACAGCGGGACCATCACGGTGGGTGAGGACGGCACCG CATCGGTGACCGCCGAGATCGCCGTCGCCTCGGTCAACACCCGCAACGAACAGCGTGACGCCCACCTTCGCGCGGCCGAC TTCTTCGACGTCGAGAACCACCCGGTCGCCACCTTCACCTCGACCGGCGTACGGGCCGACGGCGACGGCTACGTCATCGA CGGCGAGTTCACCCTCAAGGGCGTCACCAAGCCGATCACCCTCGACCTGGAGTTCAACGGCACCAACCCGGGGATGGGTC ACGGCGAGGTTGCCGGATTCGACGCCTCCGTGGTCCTCAACCGCAAGGACTTCGGCATCGACTTCGACGCCCCGCTGGAG ACCGGCGGCGCGGTCGTCGGTGACAAGATCACCGTCACCCTCGAAATCGAAGCCCTCAAGCAGGCCTGA
Upstream 100 bases:
>100_bases GACGCACGTTCGGCGGAGCCGGTGGAATACAACCGGACCATGGTCCGTTTCACCGGGGGAGTGCCGGCACCGGGCCGGCG CGCGACCGGAGGAGACACAC
Downstream 100 bases:
>100_bases TACCGACTTCCCGACGCCACGGTGCCGCACGGTGTACGACACCGTGGCGTCGTTTCTGTCCACGCGTTGTCCCAGCGCAC AATCGCTTACGCGCATCAGG
Product: YceI
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MTAATTTALSAGTWAIDPVHSTIGFSVRHLMVSKVRGTFDDYSGTITVGEDGTASVTAEIAVASVNTRNEQRDAHLRAAD FFDVENHPVATFTSTGVRADGDGYVIDGEFTLKGVTKPITLDLEFNGTNPGMGHGEVAGFDASVVLNRKDFGIDFDAPLE TGGAVVGDKITVTLEIEALKQA
Sequences:
>Translated_182_residues MTAATTTALSAGTWAIDPVHSTIGFSVRHLMVSKVRGTFDDYSGTITVGEDGTASVTAEIAVASVNTRNEQRDAHLRAAD FFDVENHPVATFTSTGVRADGDGYVIDGEFTLKGVTKPITLDLEFNGTNPGMGHGEVAGFDASVVLNRKDFGIDFDAPLE TGGAVVGDKITVTLEIEALKQA >Mature_181_residues TAATTTALSAGTWAIDPVHSTIGFSVRHLMVSKVRGTFDDYSGTITVGEDGTASVTAEIAVASVNTRNEQRDAHLRAADF FDVENHPVATFTSTGVRADGDGYVIDGEFTLKGVTKPITLDLEFNGTNPGMGHGEVAGFDASVVLNRKDFGIDFDAPLET GGAVVGDKITVTLEIEALKQA
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787295, Length=139, Percent_Identity=43.1654676258993, Blast_Score=108, Evalue=2e-25,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007372 [H]
Pfam domain/function: PF04264 YceI [H]
EC number: NA
Molecular weight: Translated: 19107; Mature: 18976
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAATTTALSAGTWAIDPVHSTIGFSVRHLMVSKVRGTFDDYSGTITVGEDGTASVTAEI CCCCCCEEECCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEE AVASVNTRNEQRDAHLRAADFFDVENHPVATFTSTGVRADGDGYVIDGEFTLKGVTKPIT EEEEECCCCCCCCCEEEEEEEECCCCCCEEEEECCCEEECCCCEEEECEEEEEECCCEEE LDLEFNGTNPGMGHGEVAGFDASVVLNRKDFGIDFDAPLETGGAVVGDKITVTLEIEALK EEEEECCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCEEECCEEEEEEEEEEEC QA CC >Mature Secondary Structure TAATTTALSAGTWAIDPVHSTIGFSVRHLMVSKVRGTFDDYSGTITVGEDGTASVTAEI CCCCCEEECCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEE AVASVNTRNEQRDAHLRAADFFDVENHPVATFTSTGVRADGDGYVIDGEFTLKGVTKPIT EEEEECCCCCCCCCEEEEEEEECCCCCCEEEEECCCEEECCCCEEEECEEEEEECCCEEE LDLEFNGTNPGMGHGEVAGFDASVVLNRKDFGIDFDAPLETGGAVVGDKITVTLEIEALK EEEEECCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCEEECCEEEEEEEEEEEC QA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14528314 [H]