| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is fdxA [H]
Identifier: 108800994
GI number: 108800994
Start: 4295826
End: 4296149
Strand: Reverse
Name: fdxA [H]
Synonym: Mmcs_4030
Alternate gene names: 108800994
Gene position: 4296149-4295826 (Counterclockwise)
Preceding gene: 108800995
Following gene: 108800993
Centisome position: 75.3
GC content: 63.58
Gene sequence:
>324_bases GTGACGTACACCATTGCCGAACCCTGTGTCGACGTTAAAGACAAGGCATGTATCGAGGAGTGCCCCGTCGACTGCATCTA TGAGGGCGCACGCATGCTGTACATCCACCCCGACGAATGCGTCGACTGTGGAGCCTGCGAACCGGTGTGCCCCGTCGAGG CGATCTACTACGAGGACGACGTCCCGGACCAGTGGAGTGCCTACACCCAGTACAACGCGGACTTCTTCGCCGAGCTCGGC TCCCCGGGCGGTGCGTCCAAGGTCGGCCAGACCGACAACGATCCGCAGGCCGTGAAGGACCTGCCCCCGCAGGGCGAGGA CTGA
Upstream 100 bases:
>100_bases TGGGATACTTCCAGGCGGATCGGCGGAACTGCCTCGGGGCGCCCGACCTGATCCGGCAGCCCACTGGACAGTTAGACCGA GGAACACTGAGGAGAATCCG
Downstream 100 bases:
>100_bases CACGCCTCCGCACGAACCCGCCCCTGAGGTAGCCCGCCGGGCGGTCTCCGCGAAGCTGCCGGAGTTCCCCTGGGACACGC TGGCGGCGGCCGGCGCGCAG
Product: 4Fe-4S ferredoxin, iron-sulfur binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MTYTIAEPCVDVKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDDVPDQWSAYTQYNADFFAELG SPGGASKVGQTDNDPQAVKDLPPQGED
Sequences:
>Translated_107_residues MTYTIAEPCVDVKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDDVPDQWSAYTQYNADFFAELG SPGGASKVGQTDNDPQAVKDLPPQGED >Mature_106_residues TYTIAEPCVDVKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDDVPDQWSAYTQYNADFFAELGS PGGASKVGQTDNDPQAVKDLPPQGED
Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]
COG id: COG1146
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR000813 [H]
Pfam domain/function: PF00037 Fer4 [H]
EC number: NA
Molecular weight: Translated: 11735; Mature: 11604
Theoretical pI: Translated: 3.58; Mature: 3.58
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 9.3 %Cys+Met (Translated Protein) 7.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYTIAEPCVDVKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD CCCCCCCCCCCCCCHHHHHHCCHHHEECCCEEEEECCHHCCCCCCCCCCCCCEEEEECCC VPDQWSAYTQYNADFFAELGSPGGASKVGQTDNDPQAVKDLPPQGED CCCCCCHHCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCC >Mature Secondary Structure TYTIAEPCVDVKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIYYEDD CCCCCCCCCCCCCHHHHHHCCHHHEECCCEEEEECCHHCCCCCCCCCCCCCEEEEECCC VPDQWSAYTQYNADFFAELGSPGGASKVGQTDNDPQAVKDLPPQGED CCCCCCHHCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 467663 [H]