| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800821
Identifier: 108800821
GI number: 108800821
Start: 4101587
End: 4102294
Strand: Reverse
Name: 108800821
Synonym: Mmcs_3857
Alternate gene names: NA
Gene position: 4102294-4101587 (Counterclockwise)
Preceding gene: 108800822
Following gene: 108800817
Centisome position: 71.9
GC content: 68.93
Gene sequence:
>708_bases GTGTGGCAACGCGGCTTCACGGTGCTGGCGATCTGCGGTCTGCTGGCAACCGCCCAACCTTCATACGGATGGGCCCAGCC CGCCGCCGAACCCGTGGCCGGTGATGCCGCGCCGCCGCCGCCCGAGGGTGCGGTTCCCTCGACGCCGCCCTCGCACACCG GGACCCCCGACGGCTGGACGCTCACGCTGTCGGCGAAAGACGAGACCCAGGCGGTGATCCCGCCGCTGACCACCGCGCTG TCGTCGCGTGAGTACGTCGTGGGCGGCACCTTCTCCGGTGACCTCGCAGGCCCCGACGCCGCCGACCCGCCGACCGGCGT CCTCGAGGTCGGCTACGAAATCGGTTGCGGCATCGACATGAGCACGTCCAACGGCGTGTCGCTGACCGGGACCGCGGGGT TGAACCCGTCGCTCGGCGTGATCGGGACCGATGTCATCTCACCGATCCCCGACGGCATCCTGCCGGGCATCGGCGGCAAC ATCGGCGGCGGTGTCACCGTCGGCCTCAAACCCGGCATCATCAACGTCGTCCCGGTGACCGAGAAGGAGTTCACCGGCGC CGCGCCGTGGGTGATGGTCAGCAACTTCCGTATCAAGATCGACGGCTGCGTCGGGCAGTCGTTCATCCGGTCCTACGCCA TCCTGACCCACGAGACCGAGATGTCCGAAGCGGTGCTGGCGTGGTACGGCACCACCAAGGTTGTCTGA
Upstream 100 bases:
>100_bases TCCTGCGGATGCCCGACTGACCGGGACGCACGTCGAACCTCCACTCACCGCCATGTAGGTTCCTCGGTTAGTGCGTCTAG TCAGCTAGGGGGCTACAACG
Downstream 100 bases:
>100_bases CCCCTACGGGAAGCGGGTCAGGCACCGCTGTTCGTCGCCGAGCACCCCGACCCGGAAGGCGTCGATCCGGGAGAACCCCG ACGGCACCGAATCGCCGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MWQRGFTVLAICGLLATAQPSYGWAQPAAEPVAGDAAPPPPEGAVPSTPPSHTGTPDGWTLTLSAKDETQAVIPPLTTAL SSREYVVGGTFSGDLAGPDAADPPTGVLEVGYEIGCGIDMSTSNGVSLTGTAGLNPSLGVIGTDVISPIPDGILPGIGGN IGGGVTVGLKPGIINVVPVTEKEFTGAAPWVMVSNFRIKIDGCVGQSFIRSYAILTHETEMSEAVLAWYGTTKVV
Sequences:
>Translated_235_residues MWQRGFTVLAICGLLATAQPSYGWAQPAAEPVAGDAAPPPPEGAVPSTPPSHTGTPDGWTLTLSAKDETQAVIPPLTTAL SSREYVVGGTFSGDLAGPDAADPPTGVLEVGYEIGCGIDMSTSNGVSLTGTAGLNPSLGVIGTDVISPIPDGILPGIGGN IGGGVTVGLKPGIINVVPVTEKEFTGAAPWVMVSNFRIKIDGCVGQSFIRSYAILTHETEMSEAVLAWYGTTKVV >Mature_235_residues MWQRGFTVLAICGLLATAQPSYGWAQPAAEPVAGDAAPPPPEGAVPSTPPSHTGTPDGWTLTLSAKDETQAVIPPLTTAL SSREYVVGGTFSGDLAGPDAADPPTGVLEVGYEIGCGIDMSTSNGVSLTGTAGLNPSLGVIGTDVISPIPDGILPGIGGN IGGGVTVGLKPGIINVVPVTEKEFTGAAPWVMVSNFRIKIDGCVGQSFIRSYAILTHETEMSEAVLAWYGTTKVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23858; Mature: 23858
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWQRGFTVLAICGLLATAQPSYGWAQPAAEPVAGDAAPPPPEGAVPSTPPSHTGTPDGWT CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE LTLSAKDETQAVIPPLTTALSSREYVVGGTFSGDLAGPDAADPPTGVLEVGYEIGCGIDM EEEECCCCCCEECCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEEECEEECCCEEC STSNGVSLTGTAGLNPSLGVIGTDVISPIPDGILPGIGGNIGGGVTVGLKPGIINVVPVT CCCCCEEEEECCCCCCCCCEEEHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECC EKEFTGAAPWVMVSNFRIKIDGCVGQSFIRSYAILTHETEMSEAVLAWYGTTKVV CCCCCCCCCEEEEECEEEEEECCCCHHHHHHHHHEEECCCHHCEEEEEECEEECC >Mature Secondary Structure MWQRGFTVLAICGLLATAQPSYGWAQPAAEPVAGDAAPPPPEGAVPSTPPSHTGTPDGWT CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE LTLSAKDETQAVIPPLTTALSSREYVVGGTFSGDLAGPDAADPPTGVLEVGYEIGCGIDM EEEECCCCCCEECCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEEECEEECCCEEC STSNGVSLTGTAGLNPSLGVIGTDVISPIPDGILPGIGGNIGGGVTVGLKPGIINVVPVT CCCCCEEEEECCCCCCCCCEEEHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECC EKEFTGAAPWVMVSNFRIKIDGCVGQSFIRSYAILTHETEMSEAVLAWYGTTKVV CCCCCCCCCEEEEECEEEEEECCCCHHHHHHHHHEEECCCHHCEEEEEECEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA