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The map label for this gene is clpS [H]

Identifier: 108800817

GI number: 108800817

Start: 4096425

End: 4096691

Strand: Reverse

Name: clpS [H]

Synonym: Mmcs_3853

Alternate gene names: 108800817

Gene position: 4096691-4096425 (Counterclockwise)

Preceding gene: 108800821

Following gene: 108800816

Centisome position: 71.8

GC content: 65.54

Gene sequence:

>267_bases
GTGGCCACGGTGCCGGATCAGGACGAGGCCACCGACGCACCCTGGGTGACCATCGTCTGGGACGATCCGGTGAATCTCAT
GACCTACGTGACCTACGTCCTGCAGAAGCTGTTCGGGTACAGCGAACCGCACGCCACCAAGCTGATGCTGCAGGTGCACA
ACGAGGGCAAGGCCGTCGTATCGGCGGGCAGCCGGGAGTCCATGGAGGTCGACGTGTCCAAGCTGCACGCCGCGGGGCTG
TGGGCGACCATGCAGCAGGACCGCTGA

Upstream 100 bases:

>100_bases
CGGCTGTCACAGCTGCCACCGTAACCCGGATGGCCGCCCCGGTATCCTGACGGGCATGGTCACACCGGCGAAAGCCCCGG
GAACCCGCGAGCAGCGAGAC

Downstream 100 bases:

>100_bases
CGGGACGCTGGAGTGCGCAAATGGAAGCGTGTGCAGACCGCCGACGGTGCGAGGTTCCGGTCCGCGCTGGAACCGCACGA
GGCGGCATTGCTGCAGAGCC

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MATVPDQDEATDAPWVTIVWDDPVNLMTYVTYVLQKLFGYSEPHATKLMLQVHNEGKAVVSAGSRESMEVDVSKLHAAGL
WATMQQDR

Sequences:

>Translated_88_residues
MATVPDQDEATDAPWVTIVWDDPVNLMTYVTYVLQKLFGYSEPHATKLMLQVHNEGKAVVSAGSRESMEVDVSKLHAAGL
WATMQQDR
>Mature_87_residues
ATVPDQDEATDAPWVTIVWDDPVNLMTYVTYVLQKLFGYSEPHATKLMLQVHNEGKAVVSAGSRESMEVDVSKLHAAGLW
ATMQQDR

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 9821; Mature: 9690

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATVPDQDEATDAPWVTIVWDDPVNLMTYVTYVLQKLFGYSEPHATKLMLQVHNEGKAVV
CCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEE
SAGSRESMEVDVSKLHAAGLWATMQQDR
ECCCCCCEEHHHHHHHHHHHHEECCCCC
>Mature Secondary Structure 
ATVPDQDEATDAPWVTIVWDDPVNLMTYVTYVLQKLFGYSEPHATKLMLQVHNEGKAVV
CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEE
SAGSRESMEVDVSKLHAAGLWATMQQDR
ECCCCCCEEHHHHHHHHHHHHEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA