| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is murI [H]
Identifier: 108800810
GI number: 108800810
Start: 4091554
End: 4092396
Strand: Reverse
Name: murI [H]
Synonym: Mmcs_3846
Alternate gene names: 108800810
Gene position: 4092396-4091554 (Counterclockwise)
Preceding gene: 108800811
Following gene: 108800809
Centisome position: 71.73
GC content: 71.06
Gene sequence:
>843_bases GTGACCGACGCGGTGGACGATCGGCTGCTGCCCGTCGGGATCTTCGATTCCGGTGTCGGGGGGCTCACGGTCGCGCGGGC GATCATCGACCAGCTGCCCGACGAGGACATCGTCTACGTCGGGGACACCGGCAACGGGCCGTACGGCCCGCTGACGATCC CGCAGATCCGCGCCCATGCCCTCGCGATCGGCGACGACCTCGTCGAGCGCGGCGTCAAGGCACTGGTGATCGCCTGCAAC ACGGCGTCGTCGGCGTGTCTGCGCGACGCCCGCGAGCGCTACGCGCCGGTACCGGTGGTGGAGGTGATCCTGCCTGCGGT GCGCCGGGCGGTGGCCACCACCCGAAACGGCCGCATCGGGGTGATCGGCACGGCGGCGACCATCGCGTCGGGCGCCTACC AGGACGCGTTCGCCGCCGCCCGCGACATCGAGGTCATCGGCGTCGCGTGTCCCCGGTTCGTCGACTTCGTCGAACGCGGT GTCACCAGCGGACGACAGGTCCTCGGACTGGCCGAGGGGTACCTCGAACCGCTGCAGCGCGCGGACGTCGACACCCTCGT GCTCGGGTGCACGCACTACCCGATGCTGTCGGGTCTGATCCAGCTCGCGATGGGCGATCAGGTCACCCTGGTGTCCAGCG CGGAGGAGACCGCCAAGGATCTGCTGCGGGTGCTGACCGAACTGGACCTGCTTCGCCCGCATCCGGCCGATCCGGGGGCC ACCCCGGCCACCCGGGTGTTCGAATCCACCGGCGACCCTGAGGCTTTCGCGACCCTGGCGACCCGCTTCCTCGGCCCGAG CCTGAACGGGGTGCGGCCCGTGCAACGCCGCATCGAGGCTTGA
Upstream 100 bases:
>100_bases GTGCGGTCGCCGGGGTCGTCGCCGCCTACGTCCTGTCCAGTCCGGAACGCAAGGCCCGCGAACTTCGCCGGTCGCGGACC GCTCCGCCGTACCTGACCTC
Downstream 100 bases:
>100_bases GGATCGCCGCACCCGTGGCCGGGGACGGGAAACCCGGCGATGTTTTCGTCAACGGGGTAATGGGCATGGCAAGCTAGTGG GCGTGCGAATCACCGTACTC
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MTDAVDDRLLPVGIFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPQIRAHALAIGDDLVERGVKALVIACN TASSACLRDARERYAPVPVVEVILPAVRRAVATTRNGRIGVIGTAATIASGAYQDAFAAARDIEVIGVACPRFVDFVERG VTSGRQVLGLAEGYLEPLQRADVDTLVLGCTHYPMLSGLIQLAMGDQVTLVSSAEETAKDLLRVLTELDLLRPHPADPGA TPATRVFESTGDPEAFATLATRFLGPSLNGVRPVQRRIEA
Sequences:
>Translated_280_residues MTDAVDDRLLPVGIFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPQIRAHALAIGDDLVERGVKALVIACN TASSACLRDARERYAPVPVVEVILPAVRRAVATTRNGRIGVIGTAATIASGAYQDAFAAARDIEVIGVACPRFVDFVERG VTSGRQVLGLAEGYLEPLQRADVDTLVLGCTHYPMLSGLIQLAMGDQVTLVSSAEETAKDLLRVLTELDLLRPHPADPGA TPATRVFESTGDPEAFATLATRFLGPSLNGVRPVQRRIEA >Mature_279_residues TDAVDDRLLPVGIFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPQIRAHALAIGDDLVERGVKALVIACNT ASSACLRDARERYAPVPVVEVILPAVRRAVATTRNGRIGVIGTAATIASGAYQDAFAAARDIEVIGVACPRFVDFVERGV TSGRQVLGLAEGYLEPLQRADVDTLVLGCTHYPMLSGLIQLAMGDQVTLVSSAEETAKDLLRVLTELDLLRPHPADPGAT PATRVFESTGDPEAFATLATRFLGPSLNGVRPVQRRIEA
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family [H]
Homologues:
Organism=Escherichia coli, GI87082355, Length=189, Percent_Identity=37.037037037037, Blast_Score=87, Evalue=9e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.1.3 [H]
Molecular weight: Translated: 29549; Mature: 29418
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAVDDRLLPVGIFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPQIRAHA CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHH LAIGDDLVERGVKALVIACNTASSACLRDARERYAPVPVVEVILPAVRRAVATTRNGRIG HHHHHHHHHCCHHEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEE VIGTAATIASGAYQDAFAAARDIEVIGVACPRFVDFVERGVTSGRQVLGLAEGYLEPLQR EEEHHHHHHCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ADVDTLVLGCTHYPMLSGLIQLAMGDQVTLVSSAEETAKDLLRVLTELDLLRPHPADPGA CCHHHEEECCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCC TPATRVFESTGDPEAFATLATRFLGPSLNGVRPVQRRIEA CHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCC >Mature Secondary Structure TDAVDDRLLPVGIFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPQIRAHA CCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHH LAIGDDLVERGVKALVIACNTASSACLRDARERYAPVPVVEVILPAVRRAVATTRNGRIG HHHHHHHHHCCHHEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEE VIGTAATIASGAYQDAFAAARDIEVIGVACPRFVDFVERGVTSGRQVLGLAEGYLEPLQR EEEHHHHHHCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ADVDTLVLGCTHYPMLSGLIQLAMGDQVTLVSSAEETAKDLLRVLTELDLLRPHPADPGA CCHHHEEECCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCC TPATRVFESTGDPEAFATLATRFLGPSLNGVRPVQRRIEA CHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA