| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800630
Identifier: 108800630
GI number: 108800630
Start: 3921438
End: 3921812
Strand: Reverse
Name: 108800630
Synonym: Mmcs_3664
Alternate gene names: NA
Gene position: 3921812-3921438 (Counterclockwise)
Preceding gene: 108800632
Following gene: 108800628
Centisome position: 68.74
GC content: 67.47
Gene sequence:
>375_bases ATGACCTCCGCGTTGGTGACTGCCGCACCACCCGCGTCAGCGCAGCCGCTGCCGAACCCACCGCTGCCACCGCCGGGTGC CGAGTGCAACCATCCCAACTGCACACCCGGCATCCAGCCGGGCGTCGTCCTCGGTTCCTACTGCAGCAACAACACCTACT ACGCCTTCGGTGTGACCTCATGGGGCCGGTTGGTGTTCTGCGGGTCCCCGCGCCGATACGAACCCCGATGGTTCCGCTCG CCCGAGATGCACGGCGTCAAGAACCAGTTCGACCTGTGTCCCGCCCTCGAAGGCGAGGTCGCCCAGGCGCCAGATGGCCT GTTCCTCACCTGCGTGGCGAAGGACGGCCGTTCCTACTGGGAGCGCGGCGACTAG
Upstream 100 bases:
>100_bases ATCGCGGCTGGTGTACATCCCTGCTGAAAACGAGAATCTGGTCCTCAGCTTGTGCGAGAATGGCGGGGTGCGATCCGCTG TCGCAGCGTTCGCTGCCCTT
Downstream 100 bases:
>100_bases GCCGGTGTGGCCATACCGCGGCCGGATGTGATTGCACGCCAACCGCTTCGACATGATCAACGTGGTGCTGAGCGGTCCAC GGCGCGGCGCTCGGCGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MTSALVTAAPPASAQPLPNPPLPPPGAECNHPNCTPGIQPGVVLGSYCSNNTYYAFGVTSWGRLVFCGSPRRYEPRWFRS PEMHGVKNQFDLCPALEGEVAQAPDGLFLTCVAKDGRSYWERGD
Sequences:
>Translated_124_residues MTSALVTAAPPASAQPLPNPPLPPPGAECNHPNCTPGIQPGVVLGSYCSNNTYYAFGVTSWGRLVFCGSPRRYEPRWFRS PEMHGVKNQFDLCPALEGEVAQAPDGLFLTCVAKDGRSYWERGD >Mature_123_residues TSALVTAAPPASAQPLPNPPLPPPGAECNHPNCTPGIQPGVVLGSYCSNNTYYAFGVTSWGRLVFCGSPRRYEPRWFRSP EMHGVKNQFDLCPALEGEVAQAPDGLFLTCVAKDGRSYWERGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13411; Mature: 13280
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSALVTAAPPASAQPLPNPPLPPPGAECNHPNCTPGIQPGVVLGSYCSNNTYYAFGVTS CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECC WGRLVFCGSPRRYEPRWFRSPEMHGVKNQFDLCPALEGEVAQAPDGLFLTCVAKDGRSYW CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC ERGD CCCC >Mature Secondary Structure TSALVTAAPPASAQPLPNPPLPPPGAECNHPNCTPGIQPGVVLGSYCSNNTYYAFGVTS CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECC WGRLVFCGSPRRYEPRWFRSPEMHGVKNQFDLCPALEGEVAQAPDGLFLTCVAKDGRSYW CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC ERGD CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA