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The map label for this gene is 108800628

Identifier: 108800628

GI number: 108800628

Start: 3919085

End: 3919753

Strand: Reverse

Name: 108800628

Synonym: Mmcs_3662

Alternate gene names: NA

Gene position: 3919753-3919085 (Counterclockwise)

Preceding gene: 108800630

Following gene: 108800623

Centisome position: 68.7

GC content: 65.62

Gene sequence:

>669_bases
ATGACCACGCGCGCCGGAGAGTCGCGACGCATCGGGGCGCCGGACGCGAAAAATCGCGGTGTGCTGCTCGACGCCGCCGA
ACAACTGCTTCTCGAGGAGGGCTACGTCGCGGTCACCTCGCGCCGCGTCGCGGAGAAGGCCGGTCTCAAACCCCAACTCG
TGCACTATTACTTCCGCACCATGGAGGACCTGTTCCGGGCGGTGTTCCGCCGCATGGCGGAGGCCGGCCTGGAGGTGCTC
TCCCAGGCGCTCGCGTCGTCGCAGCCGTTGTGGGCCCTGTGGCGGTTCAGCAACCAACCCGAGGCCACCCGGCTCACGAT
GGAGTTCATGGGGTTGGCGACTCATCGTCGAGAGTTACGGGCCGAGATCATCTACTACGCCGAGAGATTCAGGGAAGAGC
AGAACAAGGCGATCGCCACCGCGCTCGAGCGCTACGGGGTCGATGCGGCCAACGTTCCGCCCGTCGTATGGACTGTCTTC
GCGACCAGCGTGTCGCAGGCCCTGGTGGTGGAGCGAGCTTTGGGCATGACGACCGGCCACGCGGAAACCTATGCGTTCTG
CGAACAGTGGATCCGTCGGCTGGAAGGCGAACCGCTTCCCGCCGACGGTGTGACCCCGACCGGCGATCACCACTTCCGAA
TGGAACAGAGCGCACCTTTCGGTCCCTGA

Upstream 100 bases:

>100_bases
TGCTTAGCATGGCGTGAACGTCAGGGTCAAGGATGGGCGGCGGGCCGCCACTACGATCGGCGTGTCGAACACTCGTGAAT
CGGGAAAGGAACGTGATGGC

Downstream 100 bases:

>100_bases
TGGGTGGCGACGACCACTCCGTCGACCGCGAGCACGCAGTGGATGTTCGGAGTCTGCTCGCCGGGACCGCTGGTCGCCGT
GACCATTGCCCACTGGTCGG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; Regulatory Protein; Transcriptional Regulator

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MTTRAGESRRIGAPDAKNRGVLLDAAEQLLLEEGYVAVTSRRVAEKAGLKPQLVHYYFRTMEDLFRAVFRRMAEAGLEVL
SQALASSQPLWALWRFSNQPEATRLTMEFMGLATHRRELRAEIIYYAERFREEQNKAIATALERYGVDAANVPPVVWTVF
ATSVSQALVVERALGMTTGHAETYAFCEQWIRRLEGEPLPADGVTPTGDHHFRMEQSAPFGP

Sequences:

>Translated_222_residues
MTTRAGESRRIGAPDAKNRGVLLDAAEQLLLEEGYVAVTSRRVAEKAGLKPQLVHYYFRTMEDLFRAVFRRMAEAGLEVL
SQALASSQPLWALWRFSNQPEATRLTMEFMGLATHRRELRAEIIYYAERFREEQNKAIATALERYGVDAANVPPVVWTVF
ATSVSQALVVERALGMTTGHAETYAFCEQWIRRLEGEPLPADGVTPTGDHHFRMEQSAPFGP
>Mature_221_residues
TTRAGESRRIGAPDAKNRGVLLDAAEQLLLEEGYVAVTSRRVAEKAGLKPQLVHYYFRTMEDLFRAVFRRMAEAGLEVLS
QALASSQPLWALWRFSNQPEATRLTMEFMGLATHRRELRAEIIYYAERFREEQNKAIATALERYGVDAANVPPVVWTVFA
TSVSQALVVERALGMTTGHAETYAFCEQWIRRLEGEPLPADGVTPTGDHHFRMEQSAPFGP

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25002; Mature: 24871

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRAGESRRIGAPDAKNRGVLLDAAEQLLLEEGYVAVTSRRVAEKAGLKPQLVHYYFRT
CCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHH
MEDLFRAVFRRMAEAGLEVLSQALASSQPLWALWRFSNQPEATRLTMEFMGLATHRRELR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
AEIIYYAERFREEQNKAIATALERYGVDAANVPPVVWTVFATSVSQALVVERALGMTTGH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
AETYAFCEQWIRRLEGEPLPADGVTPTGDHHFRMEQSAPFGP
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCC
>Mature Secondary Structure 
TTRAGESRRIGAPDAKNRGVLLDAAEQLLLEEGYVAVTSRRVAEKAGLKPQLVHYYFRT
CCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHH
MEDLFRAVFRRMAEAGLEVLSQALASSQPLWALWRFSNQPEATRLTMEFMGLATHRRELR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
AEIIYYAERFREEQNKAIATALERYGVDAANVPPVVWTVFATSVSQALVVERALGMTTGH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
AETYAFCEQWIRRLEGEPLPADGVTPTGDHHFRMEQSAPFGP
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA