| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800632
Identifier: 108800632
GI number: 108800632
Start: 3922740
End: 3924434
Strand: Reverse
Name: 108800632
Synonym: Mmcs_3666
Alternate gene names: NA
Gene position: 3924434-3922740 (Counterclockwise)
Preceding gene: 108800633
Following gene: 108800630
Centisome position: 68.78
GC content: 67.37
Gene sequence:
>1695_bases ATGCTGACCCGCTTTGTACGAACCCAGCTGATCATCTTCACCATCGCCTCGATCGTCGGCGTGTCGGTGATGATCTTCGC GTACATGAAGGTTCCCACCCTGCTCGGCATCGGCCGCTTGACGGTGACGCTGGAATTGCCCGCGGCCGGTGGGCTCTACC GCTTCAGCAATGTGACCTACCGGGGTGTCCAGATCGGCAAGGTCATGGGAGTGAACCTGACCGAGAACGGCGCAGAGGCC ACGATGTCACTCGACACCTCGCCGAAGGTCCCCGCAGATCTGCTTGCCGAGGTGCGCAGCGTGTCCGCGGTCGGTGAGCA GTACGTGGAGCTGTTGCCCCAAACCGACTCGGGGCCTTACCTGGAGGACGGCTCGCGAATCTCCAGGGACAGAGCCACCA TTCCGCAAGAGGTGGGTCCCATGTTGGACCAGCTGAGCGCGCTGGTGGACAGTATCCCGAGCGACAGGATCCCCGATCTG CTCGACGAGACGTTCAAGGCCCTCAACGGCGCCGGCCCTGACTTCCAGTCGCTCCTGGACTCGGCCTCGAAGGTGGCGGG TGACGCCAACGCTGTCTCCGACCAGACGCGACAACTCATCGATGACGTTGGGCCGCTGTTGGATTCGCAGGCGGAATCCA CCGAGGCGATCCGGACGTGGGCGCGCAGCCTGGCCGGGGTCACCGAACAACTCGTCCAGAACGACCCCGAACTGCGCACG GTCCTGCAGCAGGGACCCGGCTTCGCGCAGGAGGTTTCGCAGCTCCTCACCCAGATCAAGCCGACGCTGCCGATATTGCT GGCGAATCTGACCAGCGTGACTCAGGTTCTGCTCACCTACAATCCGGCGCTCGAGCAACTCTTGGTGATCTTTCCGGGAA TCATCGCCGCACAGCAGTCATTCGGGCTCCCGCAGAACAATCCCACCGGCCTCCCTTCGGGTGACTTCGCGCTCACCATC AGCGACCCGGTGGCGTGCACAGTCGGCTTCCTGCCGCCCTCGCAGTGGCGGAGCCCGGAGGACATGACGACGGTCGACAC GCCTGACGGGCTGTACTGCAAGTTGCCGCAGGACTCGCCGATCAGCGTCCGTGGTGCCCGTAACTACCCGTGTATCGAGC ACCCCGGCAAGCGGGCGCCGACGGTCGAACTCTGCAACGACCCCAAGGGATATCAGCCACTCGCGATCCGTGAGCACAGT CTTGGTCCGTATCCCTTCGACCCGAATCTGGTCTCGCAGGGCGTCCCGGTCGACGAGCGGGTGGATTTCCAGGACCGGAT CTACGCCCCGCTGCAGGGCACACCGCTACCCCCGGGCGCGGTTCCGGCGGGCACACCGCCGGTCGCCCCTCCGCCCGGCG CGCCGGCCCCGGCCACGACGCCGGTCCCCGCAGGGCCGCCCGCCCCCGCGGCGGCGCCGGCCGCGGTGGCGCCTCCGCCA CCGCCCGGCAACTCGATCAACGGAACGCCCCTTCCGCCTGTACCGCCCGCGGCGGCCGAAGTGCCTCCCAGCGGCGGTGC GGTCCCCGCTGCGCCGAGCGCCTTCGGCGGCAACGGAACGGGGGGACCGTCACTCGCGGTGGCGCACTACGACCCGGCCA CCGGCGAGTACCTGACCCCTGATGGTCGACTCGAGCGCCAGACGAATTCCGCGCTGCGAGCGCCCAAGTCCTGGCAGGAC CTGTTGCCGACCTGA
Upstream 100 bases:
>100_bases AATTGCCGGCTCCGCCGGCCGATGCCCAATTGCCGGCTCCGCCGGCCGACGCCCAACCGCCGGCTCCGCCGGCCGACGCC CAACCGGGAGGCGGTGGCTG
Downstream 100 bases:
>100_bases GGTGGCTGTCGGGGAGTGACGGTGGATCAGGCCGACGGCCACCACCGGGCGACGGCCTGGCCAGGTGGTACCTGAGTAAG TGATTCGATTGCTGCGCAAC
Product: virulence factor MCE-like protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE Family Protein; MCE-Family F; Mce Family F; MCE-Family Protein; MCE-Family D; Mce-Related Protein; Mce-Family F; Mce Family D; Mce Related Protein; Mammalian Cell Entry Related Domain Protein; MCE-Family; Mce Family; Mce Family A
Number of amino acids: Translated: 564; Mature: 564
Protein sequence:
>564_residues MLTRFVRTQLIIFTIASIVGVSVMIFAYMKVPTLLGIGRLTVTLELPAAGGLYRFSNVTYRGVQIGKVMGVNLTENGAEA TMSLDTSPKVPADLLAEVRSVSAVGEQYVELLPQTDSGPYLEDGSRISRDRATIPQEVGPMLDQLSALVDSIPSDRIPDL LDETFKALNGAGPDFQSLLDSASKVAGDANAVSDQTRQLIDDVGPLLDSQAESTEAIRTWARSLAGVTEQLVQNDPELRT VLQQGPGFAQEVSQLLTQIKPTLPILLANLTSVTQVLLTYNPALEQLLVIFPGIIAAQQSFGLPQNNPTGLPSGDFALTI SDPVACTVGFLPPSQWRSPEDMTTVDTPDGLYCKLPQDSPISVRGARNYPCIEHPGKRAPTVELCNDPKGYQPLAIREHS LGPYPFDPNLVSQGVPVDERVDFQDRIYAPLQGTPLPPGAVPAGTPPVAPPPGAPAPATTPVPAGPPAPAAAPAAVAPPP PPGNSINGTPLPPVPPAAAEVPPSGGAVPAAPSAFGGNGTGGPSLAVAHYDPATGEYLTPDGRLERQTNSALRAPKSWQD LLPT
Sequences:
>Translated_564_residues MLTRFVRTQLIIFTIASIVGVSVMIFAYMKVPTLLGIGRLTVTLELPAAGGLYRFSNVTYRGVQIGKVMGVNLTENGAEA TMSLDTSPKVPADLLAEVRSVSAVGEQYVELLPQTDSGPYLEDGSRISRDRATIPQEVGPMLDQLSALVDSIPSDRIPDL LDETFKALNGAGPDFQSLLDSASKVAGDANAVSDQTRQLIDDVGPLLDSQAESTEAIRTWARSLAGVTEQLVQNDPELRT VLQQGPGFAQEVSQLLTQIKPTLPILLANLTSVTQVLLTYNPALEQLLVIFPGIIAAQQSFGLPQNNPTGLPSGDFALTI SDPVACTVGFLPPSQWRSPEDMTTVDTPDGLYCKLPQDSPISVRGARNYPCIEHPGKRAPTVELCNDPKGYQPLAIREHS LGPYPFDPNLVSQGVPVDERVDFQDRIYAPLQGTPLPPGAVPAGTPPVAPPPGAPAPATTPVPAGPPAPAAAPAAVAPPP PPGNSINGTPLPPVPPAAAEVPPSGGAVPAAPSAFGGNGTGGPSLAVAHYDPATGEYLTPDGRLERQTNSALRAPKSWQD LLPT >Mature_564_residues MLTRFVRTQLIIFTIASIVGVSVMIFAYMKVPTLLGIGRLTVTLELPAAGGLYRFSNVTYRGVQIGKVMGVNLTENGAEA TMSLDTSPKVPADLLAEVRSVSAVGEQYVELLPQTDSGPYLEDGSRISRDRATIPQEVGPMLDQLSALVDSIPSDRIPDL LDETFKALNGAGPDFQSLLDSASKVAGDANAVSDQTRQLIDDVGPLLDSQAESTEAIRTWARSLAGVTEQLVQNDPELRT VLQQGPGFAQEVSQLLTQIKPTLPILLANLTSVTQVLLTYNPALEQLLVIFPGIIAAQQSFGLPQNNPTGLPSGDFALTI SDPVACTVGFLPPSQWRSPEDMTTVDTPDGLYCKLPQDSPISVRGARNYPCIEHPGKRAPTVELCNDPKGYQPLAIREHS LGPYPFDPNLVSQGVPVDERVDFQDRIYAPLQGTPLPPGAVPAGTPPVAPPPGAPAPATTPVPAGPPAPAAAPAAVAPPP PPGNSINGTPLPPVPPAAAEVPPSGGAVPAAPSAFGGNGTGGPSLAVAHYDPATGEYLTPDGRLERQTNSALRAPKSWQD LLPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59092; Mature: 59092
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRFVRTQLIIFTIASIVGVSVMIFAYMKVPTLLGIGRLTVTLELPAAGGLYRFSNVTY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEECCCCEE RGVQIGKVMGVNLTENGAEATMSLDTSPKVPADLLAEVRSVSAVGEQYVELLPQTDSGPY CCEEECEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LEDGSRISRDRATIPQEVGPMLDQLSALVDSIPSDRIPDLLDETFKALNGAGPDFQSLLD CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHH SASKVAGDANAVSDQTRQLIDDVGPLLDSQAESTEAIRTWARSLAGVTEQLVQNDPELRT HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH VLQQGPGFAQEVSQLLTQIKPTLPILLANLTSVTQVLLTYNPALEQLLVIFPGIIAAQQS HHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH FGLPQNNPTGLPSGDFALTISDPVACTVGFLPPSQWRSPEDMTTVDTPDGLYCKLPQDSP CCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCHHCCCCCCCCCCCCCCCCEEECCCCCC ISVRGARNYPCIEHPGKRAPTVELCNDPKGYQPLAIREHSLGPYPFDPNLVSQGVPVDER EEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEECCCCCCCCCCCCHHHCCCCCCCC VDFQDRIYAPLQGTPLPPGAVPAGTPPVAPPPGAPAPATTPVPAGPPAPAAAPAAVAPPP CCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPGNSINGTPLPPVPPAAAEVPPSGGAVPAAPSAFGGNGTGGPSLAVAHYDPATGEYLTP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECC DGRLERQTNSALRAPKSWQDLLPT CCCHHHHHHHHHCCCCHHHHCCCC >Mature Secondary Structure MLTRFVRTQLIIFTIASIVGVSVMIFAYMKVPTLLGIGRLTVTLELPAAGGLYRFSNVTY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEECCCCEE RGVQIGKVMGVNLTENGAEATMSLDTSPKVPADLLAEVRSVSAVGEQYVELLPQTDSGPY CCEEECEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LEDGSRISRDRATIPQEVGPMLDQLSALVDSIPSDRIPDLLDETFKALNGAGPDFQSLLD CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHH SASKVAGDANAVSDQTRQLIDDVGPLLDSQAESTEAIRTWARSLAGVTEQLVQNDPELRT HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH VLQQGPGFAQEVSQLLTQIKPTLPILLANLTSVTQVLLTYNPALEQLLVIFPGIIAAQQS HHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH FGLPQNNPTGLPSGDFALTISDPVACTVGFLPPSQWRSPEDMTTVDTPDGLYCKLPQDSP CCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCHHCCCCCCCCCCCCCCCCEEECCCCCC ISVRGARNYPCIEHPGKRAPTVELCNDPKGYQPLAIREHSLGPYPFDPNLVSQGVPVDER EEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEECCCCCCCCCCCCHHHCCCCCCCC VDFQDRIYAPLQGTPLPPGAVPAGTPPVAPPPGAPAPATTPVPAGPPAPAAAPAAVAPPP CCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPGNSINGTPLPPVPPAAAEVPPSGGAVPAAPSAFGGNGTGGPSLAVAHYDPATGEYLTP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECC DGRLERQTNSALRAPKSWQDLLPT CCCHHHHHHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA