Click here to switch to the map view.

The map label for this gene is 108799591

Identifier: 108799591

GI number: 108799591

Start: 2783352

End: 2783912

Strand: Reverse

Name: 108799591

Synonym: Mmcs_2624

Alternate gene names: NA

Gene position: 2783912-2783352 (Counterclockwise)

Preceding gene: 108799593

Following gene: 108799590

Centisome position: 48.79

GC content: 67.91

Gene sequence:

>561_bases
ATGGCCCGCGACGCCGAAGCCACGAGAGCGCGGATCCTCGCTGCGGCAACCGCCGAGTTCTCCGCGCACGGGTATGCGGG
TGGCCGGGTTGAGCGGATCGCCGCTCAGGCGCAGTGCAACGTTCGGATGATCTACGCGTACTACGGCGGCAAGAGCGGCC
TGTTCGATGCGACCGTGGCCGACGCGCTGCGTCGCATGGCCGAGAACGTCCCCCCGCGTCCCGAGGACCTTGCCGGCTGG
GCCGGGGACGTGTTCGATCATCATCAGCGCTTCCCCGAGGTACTCCGGCTGTGTATGTGGGCTCAGCTCGAGCGGCCAGA
GGCCACTGATGAGCCGCGCGAGGCCTATCGGGACAAGGCGCTTGCCGTCGCGACGGCTGCGGCCCGACCGCTGTCGGGCG
TCGACGTTCTGGTCTTCGTCTACGCCATCGCGCAAGCCTGGCAGCTGTCCCCGAAAGGACTTACCGGACTCGAGGAAAAC
CGAGCCGGCAGCCATGGGGATGCCGCTCGCCGACAATCGGTCGTCACCGCCGTCGAGCGGATGTTGCAAGCCCAATCCTG
A

Upstream 100 bases:

>100_bases
TTCGGGCCATGTCGTCCCCACATCAGATAAGTAAATGGATACTTACTTGTAAGCTAGCCCGTGCCGGTGATGCCGTCAAT
TCAAAGCAGGGGAGAGGGTA

Downstream 100 bases:

>100_bases
GTCGACCGGGGCAAGGGGAGTCTGACAGTACCCCCACTACGGGGAACTCCCTGGCGCGCGGAATACCGCCTAACTTGCTG
TACATCGGGCTGAAATCGCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; TetR Family Regulatory Protein; Transcriptional Regulator; TetR Family Protein Regulatory Protein; Regulatory Protein

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MARDAEATRARILAAATAEFSAHGYAGGRVERIAAQAQCNVRMIYAYYGGKSGLFDATVADALRRMAENVPPRPEDLAGW
AGDVFDHHQRFPEVLRLCMWAQLERPEATDEPREAYRDKALAVATAAARPLSGVDVLVFVYAIAQAWQLSPKGLTGLEEN
RAGSHGDAARRQSVVTAVERMLQAQS

Sequences:

>Translated_186_residues
MARDAEATRARILAAATAEFSAHGYAGGRVERIAAQAQCNVRMIYAYYGGKSGLFDATVADALRRMAENVPPRPEDLAGW
AGDVFDHHQRFPEVLRLCMWAQLERPEATDEPREAYRDKALAVATAAARPLSGVDVLVFVYAIAQAWQLSPKGLTGLEEN
RAGSHGDAARRQSVVTAVERMLQAQS
>Mature_185_residues
ARDAEATRARILAAATAEFSAHGYAGGRVERIAAQAQCNVRMIYAYYGGKSGLFDATVADALRRMAENVPPRPEDLAGWA
GDVFDHHQRFPEVLRLCMWAQLERPEATDEPREAYRDKALAVATAAARPLSGVDVLVFVYAIAQAWQLSPKGLTGLEENR
AGSHGDAARRQSVVTAVERMLQAQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20270; Mature: 20139

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARDAEATRARILAAATAEFSAHGYAGGRVERIAAQAQCNVRMIYAYYGGKSGLFDATVA
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHH
DALRRMAENVPPRPEDLAGWAGDVFDHHQRFPEVLRLCMWAQLERPEATDEPREAYRDKA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LAVATAAARPLSGVDVLVFVYAIAQAWQLSPKGLTGLEENRAGSHGDAARRQSVVTAVER
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHH
MLQAQS
HHHCCC
>Mature Secondary Structure 
ARDAEATRARILAAATAEFSAHGYAGGRVERIAAQAQCNVRMIYAYYGGKSGLFDATVA
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHH
DALRRMAENVPPRPEDLAGWAGDVFDHHQRFPEVLRLCMWAQLERPEATDEPREAYRDKA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LAVATAAARPLSGVDVLVFVYAIAQAWQLSPKGLTGLEENRAGSHGDAARRQSVVTAVER
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHH
MLQAQS
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA