| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is rhlG [H]
Identifier: 108799590
GI number: 108799590
Start: 2782423
End: 2783277
Strand: Reverse
Name: rhlG [H]
Synonym: Mmcs_2623
Alternate gene names: 108799590
Gene position: 2783277-2782423 (Counterclockwise)
Preceding gene: 108799591
Following gene: 108799589
Centisome position: 48.78
GC content: 66.08
Gene sequence:
>855_bases TTGCTGTACATCGGGCTGAAATCGCTGTGCAGGAGGCCCGACCAACGAGAAAGGCGACACGTTATAAACAGCAAATTCGC TACGCAGGCAGAGCTTTTCGGGCTCAGTGGTAAACGAGCCCTCGTCACCGGCGGCACCAGGGGAATCGGGATGATGATCG CGCGCGGGCTCCTCCAGTCGGGTGCCCGCGTGGTCATCAGCTCGCGCAACGCAGAAGCGTGCGCTCACGCGCGGAAGGAG CTGTCCGTATACGGCGACGTCTGGGCCGTGCCCGCCGATCTGTCCCGGCACGACGAGTGTGAGCGCCTCGCCGACCTTGT CACAGCCGAATCCGGGAAGCTCGACATCCTCGTCAACAATGCGGGCGCAATGTGGGACGAGCCGTTGGAGACGTTCCCGG ACGAAGCCTGGAACACGGTCATCGACCTCAACCTGAAGTCGCCGTTCTGGCTCGTGCAGGCGCTGCTGCCGGCGCTCCGC AGCGCCGGTACCGCCGACGATCCTGCGCGGATCATCAACATCGGCAGCATCGCTGCCATACACATCCCCGCGCGGCCCAA CTACTCGTACTCCAGCAGCAAGGCTGCGCTGCATCAACTCACCAGAGTGCTCGCCAAGGAGCTTGGCCCGCAGCACATCA CGGTGAACGCGGTGGCGCCGGGACCGTTCCCGTCGACGATGATGGCGGCAACCCTCGACGAGTTCGGCGAGGCGATCGCG GCGTCGGCCCCGCTGCGCCGGATCGGCCGCGACGACGACATGGCGGGTGTCGCCGTGTTCCTTGCCAGCCGGGCAGGCGC TTACCTCACGGGCGCCATCGTCCCCGTCGACGGAGGGATCGCCACGACCGCGTGA
Upstream 100 bases:
>100_bases AGCGGATGTTGCAAGCCCAATCCTGAGTCGACCGGGGCAAGGGGAGTCTGACAGTACCCCCACTACGGGGAACTCCCTGG CGCGCGGAATACCGCCTAAC
Downstream 100 bases:
>100_bases TACTGCGGCGACAACGCGTGCGGTGCGGGCCTACGGTGGATGGATGGACTCCACGCTCGATCTGCGCACCGAGATCCGAG AGTTTCTGAGGTCGCGTCGG
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MLYIGLKSLCRRPDQRERRHVINSKFATQAELFGLSGKRALVTGGTRGIGMMIARGLLQSGARVVISSRNAEACAHARKE LSVYGDVWAVPADLSRHDECERLADLVTAESGKLDILVNNAGAMWDEPLETFPDEAWNTVIDLNLKSPFWLVQALLPALR SAGTADDPARIINIGSIAAIHIPARPNYSYSSSKAALHQLTRVLAKELGPQHITVNAVAPGPFPSTMMAATLDEFGEAIA ASAPLRRIGRDDDMAGVAVFLASRAGAYLTGAIVPVDGGIATTA
Sequences:
>Translated_284_residues MLYIGLKSLCRRPDQRERRHVINSKFATQAELFGLSGKRALVTGGTRGIGMMIARGLLQSGARVVISSRNAEACAHARKE LSVYGDVWAVPADLSRHDECERLADLVTAESGKLDILVNNAGAMWDEPLETFPDEAWNTVIDLNLKSPFWLVQALLPALR SAGTADDPARIINIGSIAAIHIPARPNYSYSSSKAALHQLTRVLAKELGPQHITVNAVAPGPFPSTMMAATLDEFGEAIA ASAPLRRIGRDDDMAGVAVFLASRAGAYLTGAIVPVDGGIATTA >Mature_284_residues MLYIGLKSLCRRPDQRERRHVINSKFATQAELFGLSGKRALVTGGTRGIGMMIARGLLQSGARVVISSRNAEACAHARKE LSVYGDVWAVPADLSRHDECERLADLVTAESGKLDILVNNAGAMWDEPLETFPDEAWNTVIDLNLKSPFWLVQALLPALR SAGTADDPARIINIGSIAAIHIPARPNYSYSSSKAALHQLTRVLAKELGPQHITVNAVAPGPFPSTMMAATLDEFGEAIA ASAPLRRIGRDDDMAGVAVFLASRAGAYLTGAIVPVDGGIATTA
Specific function: Required for the synthesis of the beta-hydroxy acid moiety of rhamnolipids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=255, Percent_Identity=35.6862745098039, Blast_Score=125, Evalue=4e-29, Organism=Homo sapiens, GI19923817, Length=260, Percent_Identity=29.6153846153846, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI5031737, Length=249, Percent_Identity=33.7349397590361, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI126723750, Length=254, Percent_Identity=32.6771653543307, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI7705925, Length=253, Percent_Identity=33.201581027668, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI10190704, Length=258, Percent_Identity=31.7829457364341, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI40254992, Length=239, Percent_Identity=31.7991631799163, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI15277342, Length=250, Percent_Identity=32.8, Blast_Score=92, Evalue=7e-19, Organism=Homo sapiens, GI33667109, Length=190, Percent_Identity=36.8421052631579, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI126723191, Length=187, Percent_Identity=35.2941176470588, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI66933014, Length=251, Percent_Identity=27.4900398406374, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI59889578, Length=236, Percent_Identity=30.0847457627119, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI109715829, Length=230, Percent_Identity=26.0869565217391, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI4503301, Length=234, Percent_Identity=25.6410256410256, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI40807363, Length=150, Percent_Identity=30.6666666666667, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI142976729, Length=181, Percent_Identity=28.1767955801105, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI4758504, Length=257, Percent_Identity=25.2918287937743, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI186928839, Length=209, Percent_Identity=32.5358851674641, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI225579078, Length=202, Percent_Identity=29.7029702970297, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI1790717, Length=255, Percent_Identity=33.3333333333333, Blast_Score=135, Evalue=2e-33, Organism=Escherichia coli, GI1787335, Length=246, Percent_Identity=34.9593495934959, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1789208, Length=254, Percent_Identity=34.6456692913386, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1787905, Length=247, Percent_Identity=34.8178137651822, Blast_Score=118, Evalue=5e-28, Organism=Escherichia coli, GI87082160, Length=267, Percent_Identity=31.8352059925094, Blast_Score=107, Evalue=7e-25, Organism=Escherichia coli, GI87082100, Length=263, Percent_Identity=30.7984790874525, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI2367365, Length=245, Percent_Identity=30.6122448979592, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1788459, Length=243, Percent_Identity=32.0987654320988, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI2367175, Length=250, Percent_Identity=30.4, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1789378, Length=277, Percent_Identity=29.6028880866426, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1786812, Length=256, Percent_Identity=29.6875, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1787820, Length=182, Percent_Identity=31.8681318681319, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI1789057, Length=255, Percent_Identity=24.7058823529412, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1787545, Length=265, Percent_Identity=27.5471698113208, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17555706, Length=246, Percent_Identity=31.3008130081301, Blast_Score=114, Evalue=5e-26, Organism=Caenorhabditis elegans, GI17562910, Length=263, Percent_Identity=31.9391634980989, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI25147288, Length=247, Percent_Identity=33.1983805668016, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17561402, Length=257, Percent_Identity=33.4630350194552, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17562906, Length=264, Percent_Identity=33.7121212121212, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17560220, Length=265, Percent_Identity=34.3396226415094, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17560676, Length=253, Percent_Identity=30.4347826086957, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17559104, Length=261, Percent_Identity=32.9501915708812, Blast_Score=101, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17544670, Length=270, Percent_Identity=27.4074074074074, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17562908, Length=264, Percent_Identity=31.8181818181818, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17560332, Length=264, Percent_Identity=32.9545454545455, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI193204405, Length=265, Percent_Identity=32.8301886792453, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17565030, Length=261, Percent_Identity=33.7164750957854, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI115534694, Length=254, Percent_Identity=29.1338582677165, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI72000259, Length=261, Percent_Identity=30.6513409961686, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17560150, Length=262, Percent_Identity=30.1526717557252, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17538480, Length=264, Percent_Identity=31.0606060606061, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17531453, Length=265, Percent_Identity=32.8301886792453, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17562990, Length=263, Percent_Identity=29.277566539924, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17562904, Length=264, Percent_Identity=28.7878787878788, Blast_Score=91, Evalue=8e-19, Organism=Caenorhabditis elegans, GI71994604, Length=253, Percent_Identity=28.4584980237154, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17538486, Length=266, Percent_Identity=31.9548872180451, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17551412, Length=267, Percent_Identity=29.9625468164794, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI71994600, Length=252, Percent_Identity=27.7777777777778, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17563726, Length=266, Percent_Identity=30.4511278195489, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17536651, Length=255, Percent_Identity=28.6274509803922, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI193203117, Length=148, Percent_Identity=33.7837837837838, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17536025, Length=255, Percent_Identity=28.2352941176471, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI193203115, Length=143, Percent_Identity=34.2657342657343, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17561272, Length=255, Percent_Identity=29.8039215686275, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17558006, Length=239, Percent_Identity=28.8702928870293, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI71997099, Length=219, Percent_Identity=30.1369863013699, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17564282, Length=145, Percent_Identity=27.5862068965517, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17532805, Length=156, Percent_Identity=30.1282051282051, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=279, Percent_Identity=27.9569892473118, Blast_Score=89, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6322861, Length=192, Percent_Identity=28.6458333333333, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323882, Length=242, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6322226, Length=219, Percent_Identity=28.7671232876712, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI21355319, Length=275, Percent_Identity=33.4545454545455, Blast_Score=117, Evalue=6e-27, Organism=Drosophila melanogaster, GI23397609, Length=251, Percent_Identity=32.2709163346614, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI24639444, Length=247, Percent_Identity=31.5789473684211, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24644339, Length=254, Percent_Identity=30.3149606299213, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI28571526, Length=251, Percent_Identity=30.2788844621514, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI24644337, Length=254, Percent_Identity=34.6456692913386, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI21357041, Length=251, Percent_Identity=29.8804780876494, Blast_Score=98, Evalue=6e-21, Organism=Drosophila melanogaster, GI24643142, Length=257, Percent_Identity=32.295719844358, Blast_Score=97, Evalue=8e-21, Organism=Drosophila melanogaster, GI281364892, Length=181, Percent_Identity=32.0441988950276, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI161076371, Length=233, Percent_Identity=31.7596566523605, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI28573296, Length=228, Percent_Identity=29.3859649122807, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI17737361, Length=252, Percent_Identity=28.1746031746032, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI22024069, Length=200, Percent_Identity=30.5, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24647946, Length=252, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI45553409, Length=252, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI24647948, Length=252, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI21358495, Length=217, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24656154, Length=201, Percent_Identity=31.3432835820896, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI19922628, Length=201, Percent_Identity=31.3432835820896, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24586328, Length=200, Percent_Identity=28.5, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI19921754, Length=200, Percent_Identity=28.5, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 30279; Mature: 30279
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYIGLKSLCRRPDQRERRHVINSKFATQAELFGLSGKRALVTGGTRGIGMMIARGLLQS CEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHC GARVVISSRNAEACAHARKELSVYGDVWAVPADLSRHDECERLADLVTAESGKLDILVNN CCEEEEECCCHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECC AGAMWDEPLETFPDEAWNTVIDLNLKSPFWLVQALLPALRSAGTADDPARIINIGSIAAI CCCCCCCHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHEEEECCEEEE HIPARPNYSYSSSKAALHQLTRVLAKELGPQHITVNAVAPGPFPSTMMAATLDEFGEAIA EECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH ASAPLRRIGRDDDMAGVAVFLASRAGAYLTGAIVPVDGGIATTA HCCHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCC >Mature Secondary Structure MLYIGLKSLCRRPDQRERRHVINSKFATQAELFGLSGKRALVTGGTRGIGMMIARGLLQS CEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHC GARVVISSRNAEACAHARKELSVYGDVWAVPADLSRHDECERLADLVTAESGKLDILVNN CCEEEEECCCHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECC AGAMWDEPLETFPDEAWNTVIDLNLKSPFWLVQALLPALRSAGTADDPARIINIGSIAAI CCCCCCCHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHEEEECCEEEE HIPARPNYSYSSSKAALHQLTRVLAKELGPQHITVNAVAPGPFPSTMMAATLDEFGEAIA EECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH ASAPLRRIGRDDDMAGVAVFLASRAGAYLTGAIVPVDGGIATTA HCCHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9721281; 10984043 [H]